Job Description P39305 Confidence 100.00% Date Thu Jan 5 11:59:09 GMT 2012 Rank 15 Aligned Residues 254 % Identity 17% Template c3ju2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein smc04130; PDBTitle: crystal structure of protein smc04130 from sinorhizobium meliloti 1021 Resolution 1.80 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	I	Y	E	K	A	L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Sequence		L	S	I	N	L	A	T	I	R	E	Q	C	G	F	A	E	A	V	D	I	C	L	K	H	G	I	T	A	I	A	P	W	R	D	Q	V	.	.	.	.	.	.	.	.	.	A	A	I	G	L	G	E	A	G	R	I	V	R	A	N	G	L	K	L	T	G	L	C	R	G	G	.	.	.	.	F	F	P	A	P
Template Known Secondary structure						G	G	G	G	T	T	T													T	T							B					.	.	.	.	.	.	.	.	.															T	T				S							.	.	.	.					S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.																											.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.										.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160
Predicted Secondary structure																																				.																																							.	.	.	.	.	.
Query SS confidence																																				.																																							.	.	.	.	.	.
Query Sequence		D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	.	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	.	.	.	.	.	.	P
Query Conservation																																				.																																							.	.	.	.	.	.
Alig confidence																																				.																																							.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	S	G	R	E	K	A	I	D	D	N	R	R	A	V	D	E	A	A	E	L	G	A	D	C	L	V	L	V	A	G	G	L	P	G	G	S	K	N	I	D	A	A	R	R	M	V	V	E	G	I	A	A	V	L	P	H	A	R	A	A	G	V	P	L	A	I	E	P	L	H	P	M	Y	A	A	D	R	A
Template Known Secondary structure		S																						T	B	S							B				T	T																										T										G	G	G	T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																													.																				.	.	.	.
Query SS confidence																																													.																				.	.	.	.
Query Sequence		L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	.	I	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	.	.	.	.	V	P	F	G	E	G	V	V	D	F	E	R	C
Query Conservation																																													.																				.	.	.	.
Alig confidence																		.																											.																				.	.	.	.
Template Conservation																		.
Template Sequence		C	V	N	T	L	G	Q	A	L	D	I	C	E	T	L	G	.	P	G	V	G	V	A	I	D	V	Y	H	V	W	W	D	P	D	L	A	N	Q	I	A	R	A	G	K	M	K	A	I	L	A	H	H	I	C	D	W	L	V	P	T	K	D	M	L	T	D	R	G	M	M	G	D	G	V	I	D	L	K	G	I
Template Known Secondary structure		S																.	T	T											T	T		T	T											T	T									B			S	S				S	S	S	B		B		T	T	S	S	S
Template Predicted Secondary structure																		.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		F	E	T	L	K	Q	S	G	Y	C	G	P	Y	L	I	E	M	W	S	E	T	A	.	.	.	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R	M
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		R	R	R	I	E	A	A	G	F	H	G	A	Q	E	V	E	I	F	S	A	D	N	W	W	K	R	P	A	D	E	V	I	A	T	C	V	E	R	Y	R	N	C	C
Template Known Secondary structure								T	T											B	T	T	T	G	G	G	S																	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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