Job Description P39305 Confidence 41.40% Date Thu Jan 5 11:59:09 GMT 2012 Rank 316 Aligned Residues 156 % Identity 10% Template c3js3C_ PDB info PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.									20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.
Predicted Secondary structure																				.	.	.	.	.	.	.	.													.	.	.																																					.	.
Query SS confidence																				.	.	.	.	.	.	.	.													.	.	.																																					.	.
Query Sequence		L	S	K	Q	I	P	L	G	I	Y	E	K	A	L	P	A	G	E	.	.	.	.	.	.	.	.	C	W	L	E	R	L	Q	L	A	K	T	L	.	.	.	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	.	.	G
Query Conservation																				.	.	.	.	.	.	.	.													.	.	.																																					.	.
Alig confidence																				.	.	.	.	.	.	.	.													.	.	.																.	.	.	.	.																	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		M	K	R	K	V	Q	V	K	N	I	T	I	G	E	G	R	P	K	I	C	V	P	I	I	G	K	N	K	K	D	I	I	K	E	A	K	E	L	K	D	A	C	L	D	I	I	E	W	R	V	D	F	F	E	N	V	.	.	.	.	.	E	N	I	K	E	V	K	E	V	L	Y	E	L	R	S	Y	I	H	D
Template Known Secondary structure									T	T				T	S	S	S										S	S											T	T	T	S	S		S						G	G	G		T	T	T	.	.	.	.	.	T																	T	T
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	.	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R
Query Conservation																																												.
Alig confidence						.																											.	.	.	.	.	.	.					.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																											.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	L	L	.	F	T	F	R	S	V	V	E	G	G	E	K	L	I	S	R	D	Y	Y	T	T	L	N	K	E	I	.	.	.	.	.	.	.	S	N	T	G	L	V	D	L	I	D	V	E	L	F	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	V	I	D	E	V	V	N	F	A	H	K
Template Known Secondary structure		S				.						G	G	G	T		S																.	.	.	.	.	.	.			T	S			S						G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.																											.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.														.	.	.	.	.	.	.	.	130	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	F	Q	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	V	K	V	I	I	S	N	H	D	F	N	K	T	P	K	K	E	E	I	V	S	R	L	C	R	M	Q	E	L	G	A	D	L	P
Template Known Secondary structure		T	T										S	S																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions