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Job DescriptionP39305
Confidence74.67%DateThu Jan 5 11:59:09 GMT 2012
Rank176Aligned Residues206
% Identity13%Templatec3eegB_
PDB info PDB header:transferaseChain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of a 2-isopropylmalate synthase from2 cytophaga hutchinsonii
Resolution2.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30........ .40.........50.........60.........70.........80....
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Query Sequence  LERLQLAKTLGFDFVEM. . . . . . . . . . . . . . . . . SVDETDDRLSRLNWSREQRLALVNAIVETGVRVPSMCLSAHRRFPL
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Template Sequence  IIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAVTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIGSSDIHIE
Template Known Secondary structure  TTT
S
TTT
TT

SS
S
TT
SS
S
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   2930.........40.........50.........60.........70.........80.........90.........100........
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  GSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMSS
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Template Sequence  HKLR. STRENILEXAVAAVKQAKKVVHEVEFFCEDAGRAD. . . . . . . . . . QAFLARXVEAVIEAGADV. VNIPDTTGYXL
Template Known Secondary structure  TST.T

TTTT

SSSTTTS
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   109110.. .......120.........130.........140....... ..150.........160..... ....170......
 
   165....170.........180 .........190.........200.........210.........220.........230........
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Query Sequence  ISKALGYAHYLNNPWF. . . QLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFET. . .
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Template Sequence  PWQYGERIKYLXDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTINGIGE. . . . . . RAGNTALEEVVXAXEC
Template Known Secondary structure 
TTGGGS
B
SSS
TTT

BGGG

S......TT
B
BT
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   177..180.........190.........200.........210.........220.........230.... .....240.........250
 
   239240.....
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Query Sequence  . LKQSGYC
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Template Sequence  HKETLGLE
Template Known Secondary structure  T
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   251.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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