Job Description P39305 Confidence 100.00% Date Thu Jan 5 11:59:09 GMT 2012 Rank 5 Aligned Residues 255 % Identity 18% Template c3cnyA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:inositol catabolism protein iole; PDBTitle: crystal structure of a putative inositol catabolism protein iole2 (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a3 resolution Resolution 1.85 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.									.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.
Query Sequence		K	Q	I	P	L	G	I	Y	E	K	A	L	P	.	.	.	.	.	.	.	.	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C
Query Conservation															.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	I	K	W	G	I	A	P	I	G	W	R	N	D	D	I	P	S	I	G	K	D	N	N	L	Q	Q	L	L	S	D	I	V	V	A	G	F	Q	G	T	E	V	G	G	F	F	P	G	P	.	.	.	.	.	.	.	.	.	.	.	.	E	K	L	N	Y	E	L	K	L	R	N	L	E	I	A	G	Q	W
Template Known Secondary structure			T							G	G	G	T			S	S	S	T	T	T	T	T	T														T								T	T					.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.													.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.													.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.
Template Sequence		F	S	S	Y	I	.	.	.	.	.	.	.	I	R	D	G	I	E	K	A	S	E	A	F	E	K	H	C	Q	Y	L	K	A	I	N	A	P	V	A	V	V	S	E	Q	T	Y	T	I	Q	R	S	D	T	A	N	I	F	K	D	K	P	Y	F	T	D	K	E	W	D	E	V	C	K	G	L	N	H	Y	G	E
Template Known Secondary structure							.	.	.	.	.	.	.																						T	T										T	T			T	T		S	S			T	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		I	A	A	K	Y	G	L	K	V	A	Y	H	H	H	X	G	T	G	I	Q	T	K	E	E	T	D	R	L	X	A	N	T	D	P	K	L	V	G	L	L	Y	D	T	G	H	I	A	V	S	D	G	D	Y	X	A	L	L	N	A	H	I	D	R	V	V	H	V	H	F	K	D	V	R	R	S	K	E	E	E	C
Template Known Secondary structure						T	T									T	T	S	S	S		S										T	S		T	T	T															S		S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
																		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	Y	L	I	E	M	W	.	S	E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		R	A	K	G	L	T	F	Q	G	S	F	L	N	G	X	F	T	V	P	G	D	G	D	L	D	F	K	P	V	Y	D	K	L	I	A	N	N	Y	K	G	W	I	V	V	E	A	E	Q	D	P	S	K	A	N	P	L	E	X	A	Q	I	A	H	R	Y	I	K	Q	H	L	I	E
Template Known Secondary structure					T									T	T					T	T	T	S	S													T	T													T	T	T	S																	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions