Job Description P39305 Confidence 98.89% Date Thu Jan 5 11:59:09 GMT 2012 Rank 41 Aligned Residues 225 % Identity 15% Template c3bwwA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:protein of unknown function duf692/cog3220; PDBTitle: crystal structure of a duf692 family protein (hs_1138) from2 haemophilus somnus 129pt at 2.20 a resolution Resolution 2.20 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R
Query Conservation
Alig confidence																				.	.	.																							.	.	.	.	.											.	.	.	.											.	.	.	.
Template Conservation																				.	.	.																							.	.	.	.	.											.	.	.	.											.	.	.	.
Template Sequence		A	E	G	F	L	Q	L	R	N	N	D	R	I	Q	F	X	E	I	.	.	.	A	P	E	N	W	I	K	X	G	G	F	A	R	Y	Q	F	D	K	V	A	E	K	.	.	.	.	.	I	P	I	L	I	H	G	L	S	L	.	.	.	.	S	L	G	G	Q	A	P	L	D	K	.	.	.	.	E	L	L	S
Template Known Secondary structure									S	S	S	S	S	S						.	.	.							T													T	T	T	.	.	.	.	.	S					B		S			.	.	.	.		T	T		S	S					.	.	.	.
Template Predicted Secondary structure																				.	.	.																							.	.	.	.	.											.	.	.	.											.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.					.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	.	.	.	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N
Query Conservation																																																																.	.	.
Alig confidence																																															.	.	.															.	.	.
Template Conservation																																															.	.	.
Template Sequence		S	I	K	A	X	I	K	Q	Y	N	T	P	F	F	S	D	H	L	S	F	L	L	P	X	P	F	T	D	E	A	V	K	H	T	A	A	R	I	R	E	V	Q	D	F	L	.	.	.	E	I	Q	I	S	V	E	N	T	S	Y	Y	L	H	S	E	T	S	T	X	N	E	V	E	F	L	N	A	I	V	Q	E
Template Known Secondary structure										T	T								S						B																						.	.	.	T	S										S		B		T	T		S	S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.		.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure															.	.	.	.				.												.
Query SS confidence															.	.	.	.				.												.
Query Sequence		P	W	F	Q	L	Y	P	D	I	G	N	L	S	.	.	.	.	A	W	D	.	N	D	V	Q	M	E	L	Q	A	G	I	.	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	Y	L	I	E
Query Conservation															.	.	.	.				.												.
Alig confidence															.	.	.	.				.												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	C	G	I	H	L	D	V	N	N	I	Y	V	N	A	V	N	H	G	L	L	D	P	H	V	F	I	D	N	V	D	L	K	R	V	N	Y	I	H	I	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	W	D	L	L	E	Y	T	Y	A	R	L	S	H	X	P	P	T	L	L	E
Template Known Secondary structure			T																				S									S		G	G	G									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T		S	S	B
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		M	W	S	E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K	A	G	M
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	R	F	P	P	F	E	K	L	C	K	E	V	D	I	I	H	Q	L	Q	Q	K	Y	V	K	K	R	G	L
Template Known Secondary structure		.																											T
Template Predicted Secondary structure		.
Template SS confidence
			271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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