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Job DescriptionP39305
Confidence27.74%DateThu Jan 5 11:59:09 GMT 2012
Rank393Aligned Residues92
% Identity20%Templatec2zidA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dextran glucosidase; PDBTitle: crystal structure of dextran glucosidase e236q complex with2 isomaltotriose
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40...... ...50.........60.........70.........80...
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Query Sequence  WLERLQLAKTLGFDFVEMSVDETDDR. . . . . . . . . . . . LSRLNWSREQRLALVNAIVETGVRVPSMCLSAHRRFP. . . . .
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Template Sequence  ITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHTSDEHAWFI
Template Known Secondary structure  TTT
S





TTTTSS
S
GGG

TTT


SB

TTS
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   33......40.........50.........60.........70.........80.........90.........100.........110..
 
   84.....90.........100.........110.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LGSEDDAVRAQGLEIMRKAIQFAQDVGI
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Template Sequence  EAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNFWI. . . . DKGI
Template Known Secondary structure 
TTSGGGGGB
SS

S
B
TTSSBSTTTT
SS
TTS
BB
TT
....TTT
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   113......120.........130.........140.........150.........160.........170.........180.... ....
 
   112....
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Query Sequence  RVIQL
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Template Sequence  GGFRM
Template Known Secondary structure 
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   189190...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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