Job Description P39305 Confidence 79.70% Date Thu Jan 5 11:59:09 GMT 2012 Rank 143 Aligned Residues 194 % Identity 15% Template c2yswB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of the 3-dehydroquinate dehydratase from aquifex2 aeolicus vf5 Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L
Query Conservation
Alig confidence																																.	.	.	.	.	.																					.
Template Conservation																																.	.	.	.	.	.																					.
Template Sequence		D	D	T	N	F	S	E	N	L	K	K	A	K	E	K	G	A	D	I	V	E	L	R	V	D	Q	F	S	D	T	.	.	.	.	.	.	S	L	N	Y	V	K	E	K	L	E	E	V	H	S	Q	G	L	K	T	I	.	L	T	I	R	S	P	E	E	G	G	R	E	V	K	N	R	E	E	L	F	E	E	L
Template Known Secondary structure			S	T	T											T	T		S						G	G	G		S			.	.	.	.	.	.															T	T					.						G	G	G	T					T	T
Template Predicted Secondary structure																																.	.	.	.	.	.																					.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
																97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																								.	.	.	.	.									.	.	.	.	.
Template Conservation																																							.	.																								.	.	.	.	.									.	.	.	.	.
Template Sequence		S	P	L	S	D	Y	T	D	I	E	L	S	S	R	G	L	L	V	K	L	Y	N	I	T	K	E	A	G	K	K	L	I	I	S	Y	H	N	.	.	F	E	L	T	P	P	N	W	I	I	R	E	V	L	R	E	G	Y	R	Y	G	G	I	.	.	.	.	.	P	K	I	A	V	K	A	N	.	.	.	.	.
Template Known Secondary structure		G	G	G	S	S						T	T															T	T										.	.	S	S																		T	T	S		.	.	.	.	.								S	.	.	.	.	.
Template Predicted Secondary structure																																							.	.																								.	.	.	.	.									.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q
Query Conservation
Alig confidence		.																						.	.																												.	.	.	.	.	.	.	.	.
Template Conservation		.																						.	.																												.	.	.	.	.	.	.	.	.
Template Sequence		.	S	Y	E	D	V	A	R	L	L	C	I	S	R	Q	V	E	G	E	K	I	L	.	.	I	S	M	G	D	Y	G	K	I	S	R	L	A	G	Y	V	F	G	S	V	I	T	Y	C	S	L	E	.	.	.	.	.	.	.	.	.	K	A	F	A	P	G	Q	I	P	L	E	E	M	V	E	L	R	K	K
Template Known Secondary structure		.	S												T	T	S		S		B			.	.				T	T	G	G	G	G					G	G	G	G	T	B						B	S	S	.	.	.	.	.	.	.	.	.	S			S	T	T			B
Template Predicted Secondary structure		.																						.	.																												.	.	.	.	.	.	.	.	.
Template SS confidence
			149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.										.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions