Job Description P39305 Confidence 56.86% Date Thu Jan 5 11:59:09 GMT 2012 Rank 271 Aligned Residues 112 % Identity 13% Template c2y0fD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27 Resolution 2.50 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		P	L	G	I	Y	E	K	A	L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	.	.	.	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P
Query Conservation																										.	.	.
Alig confidence																										.	.	.																			.	.	.	.	.	.	.	.																	.										.
Template Conservation																																															.	.	.	.	.	.	.	.																	.										.
Template Sequence		P	I	A	V	Q	S	M	T	N	T	P	T	R	D	V	E	A	T	T	A	Q	V	L	E	L	H	R	A	G	S	E	I	V	R	L	T	V	N	D	E	E	A	A	K	A	.	.	.	.	.	.	.	.	V	P	E	I	K	R	R	L	L	A	E	G	V	E	V	P	.	L	V	G	D	F	H	F	N	G	.
Template Known Secondary structure											S		T	T															T	T		S								S					T	T	.	.	.	.	.	.	.	.											T	T					.						S	S			.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.																	.										.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.									.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	.	.	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L
Query Conservation																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	L	L	R	K	Y	P	K	M	A	E	A	L	D	K	F	R	I	N	P	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	E	M	I	R	I	A	M	D	L	G	K	P	V	R	I	G	A	N	W	G	S	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									T	T	T									G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions