Job Description P39305 Confidence 30.74% Date Thu Jan 5 11:59:09 GMT 2012 Rank 369 Aligned Residues 83 % Identity 13% Template c2xrzA_ PDB info PDB header:lyase/dna Chain: A: PDB Molecule:deoxyribodipyrimidine photolyase; PDBTitle: x-ray structure of archaeal class ii cpd photolyase from2 methanosarcina mazei in complex with intact cpd-lesion Resolution 2.20 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P
Query Conservation
Alig confidence																																																										.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		L	L	F	S	R	A	I	A	K	E	A	N	V	P	V	V	V	V	F	C	L	T	D	E	F	L	E	A	G	I	R	Q	Y	E	F	M	L	K	G	L	Q	E	L	E	V	S	L	S	R	K	K	I	P	S	F	F	.	.	.	.	.	L	R	G	D	P	G	E	K	I	S	R	F	V	K	D	Y	N	A	G
Template Known Secondary structure												T	T											G	G	G	G	G	S																						T	T						.	.	.	.	.			S													T	T		S
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		179	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	Q	L	Y	P	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	V	T	D	F	S	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions