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Job DescriptionP39305
Confidence61.73%DateThu Jan 5 11:59:09 GMT 2012
Rank242Aligned Residues111
% Identity9%Templatec2xn1B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-galactosidase; PDBTitle: structure of alpha-galactosidase from lactobacillus acidophilus ncfm2 with tris
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   97..100.........110.........120.........130. ........140.........150.........160.........
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Query Sequence  EIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETR. . . . . . . RRFRDGLKESVEMASRAQVTLAMEIMDYPLMSSISKAL
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Template Sequence  DKLKTIVDKAKKLGLEMFVLDDGWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHEQGLKFGLWFEPEMISYESNLYK
Template Known Secondary structure  T


TTSBTT
SSTTS
TT

SB
TTT
TT
TT

TT
SSS
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   350.........360.........370.........380.........390.........400.........410.........420.........
 
   170.........180.........190.........200.......
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Query Sequence  GYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHI
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Template Sequence  EHPDYLMHVPGRKPCPSRNQYVLELGRKEVRDNIFEQM
Template Known Secondary structure 
GGGB


TTS



BTTBB
TTS
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   430.........440.........450.........460.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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