Job Description P39305 Confidence 100.00% Date Thu Jan 5 11:59:09 GMT 2012 Rank 22 Aligned Residues 266 % Identity 15% Template c2x7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc Resolution 2.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	G	I	Y	E	K	A	L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G
Query Conservation
Alig confidence												.	.	.																														.
Template Conservation												.	.	.																														.
Template Sequence		I	K	I	G	A	H	M	P	I	S	.	.	.	K	G	F	D	R	V	P	Q	D	T	V	N	I	G	G	N	S	F	Q	I	F	P	H	N	A	R	S	W	S	.	A	K	L	P	S	D	E	A	A	T	K	F	K	R	E	M	K	K	H	G	I	D	W	E	N	A	F	C	H	S	G	Y	L	I	N	L	A
Template Known Secondary structure											T	.	.	.	T		G	G	G								T	T		S						S				S	S	S		.																				T			G	G	G							T	T			T	T
Template Predicted Secondary structure												.	.	.																														.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	.	Y	P	L	M	S	S
Query Conservation																																																																											.
Alig confidence																																									.																																		.
Template Conservation																																									.
Template Sequence		S	P	K	D	D	I	W	Q	K	S	V	E	L	L	K	K	E	V	E	I	C	R	K	L	G	I	R	Y	L	N	I	H	P	G	S	H	L	G	T	.	G	E	E	E	G	I	D	R	I	V	R	G	L	N	E	V	L	N	N	T	E	G	V	V	I	L	L	E	N	V	S	Q	K	G	G	N	I	G	Y	K
Template Known Secondary structure			S	S																						T												T	T	S	.																		T	T			S												T	T				S	S
Template Predicted Secondary structure																																									.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure														.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.
Query SS confidence														.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.
Query Sequence		I	S	K	A	L	G	Y	A	H	Y	L	N	.	N	P	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	.	.	.	.	.	.	M	E	L	Q	A	G	I	.	.	.	.	.	G	H	I	V	A	V	H	V	K	D	T	K	P	.	.	.	.	G	V	F	K	N	V	P	F	G	E	G
Query Conservation														.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.
Alig confidence														.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		L	E	Q	L	K	K	I	R	D	L	V	D	Q	R	D	R	V	A	I	T	Y	D	T	C	H	G	F	D	S	G	Y	D	I	T	K	K	E	G	V	E	A	L	L	N	E	I	E	S	L	F	G	L	E	R	L	K	M	I	H	L	N	D	S	K	Y	P	L	G	A	A	K	D	R	H	E	R	I	G	S	G
Template Known Secondary structure													S		G	G	G													T	T			T	T	S															T		G	G	G										S	S		T	T									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	.	P	Y	L	I	E	M	W	S	E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K	A	G	M	V
Query Conservation																				.
Alig confidence																				.										.	.	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		F	I	G	E	E	G	F	A	V	F	F	S	F	K	E	I	Q	E	V	P	W	I	L	E	T	P	G	G	.	.	.	.	.	N	E	E	H	A	E	D	I	K	K	V	F	E	I	I	E	K	F	G	I	E
Template Known Secondary structure		S	S										T						T	S							S	S		.	.	.	.	.																		T	T
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.						.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions