Job Description P39305 Confidence 67.38% Date Thu Jan 5 11:59:09 GMT 2012 Rank 204 Aligned Residues 114 % Identity 21% Template c2wcsA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha amylase, catalytic region; PDBTitle: crystal structure of debranching enzyme from nostoc2 punctiforme (npde) Resolution 2.80 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.												.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query Sequence		W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	.	.	.	.	.	.	.	.	.	.	.	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Conservation
Template Sequence		I	M	E	D	L	D	Y	I	Q	N	L	G	I	N	A	I	Y	F	T	P	I	F	Q	S	A	S	N	H	R	Y	H	T	H	D	Y	Y	Q	V	D	P	M	L	G	G	N	E	A	F	K	E	L	L	D	A	A	H	Q	R	N	I	K	V	V	L	D	G	V	F	N	H	S	S	R	G	F	F	F	F	H	D
Template Known Secondary structure					T								T							S						S	T	T		T	T	S									G	G	G	T															T	T										S	B			T	T	S
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
																																													84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																																																	.	.	.	.
Template Sequence		V	L	E	N	G	P	H	S	P	W	V	N	W	F	K	I	E	G	W	P	L	S	P	Y	N	G	E	F	P	A	N	Y	V	G	W	A	G	N	R	A	L	P	E	F	N	H	D	N	P	E	V	R	E	Y	I	M	E	I	A	E	Y	W	L	.	.	.	.	K	F	G	I	D	G	W	R	L	D	V	P	F
Template Known Secondary structure						G	G	G		T	T	G	G	G	B		B		S	S	S			S	S			S	S			S	B		B	G	G	G		T	T	S	B	B	B		T	T	S																.	.	.	.			T								S	T	T
Template Predicted Secondary structure																																																																	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	K	T	P	G	F	W	Q	E	F	R	D	R	T	K	A	I
Template Known Secondary structure		S				T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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