Job Description P39305 Confidence 34.08% Date Thu Jan 5 11:59:09 GMT 2012 Rank 352 Aligned Residues 91 % Identity 22% Template c2vncB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:glycogen operon protein glgx; PDBTitle: crystal structure of glycogen debranching enzyme trex from2 sulfolobus solfataricus Resolution 3.0 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query Sequence		E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	.	.	.	.	.	.	.	.	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	M	I	S	Y	L	K	D	L	G	I	T	T	V	E	L	M	P	V	F	H	F	I	D	Q	R	F	L	T	D	K	G	L	T	N	Y	W	G	Y	D	P	I	N	F	F	S	P	E	C	R	Y	S	S	T	G	C	L	G	G	Q	V	L	S	F	K	K	M	V	N	E	L	H	N	A	G	I	E	V	I	I
Template Known Secondary structure											T										B		B								T	T	S					S				B	S		S	S	S	B		G	G	G		T	T		S	S	S																	T
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.																																						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	C	L	S	A	H	R	R	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		D	V	V	Y	N	H	T	A	E	G	N	H	L	G	P	T	L	S	F	R	G	I	D	N	T	A	Y	Y	M	L	Q	P	D	N	K	R	Y	Y	L	D	F	T	G	T	G	N	T	L	N	L	S	H	P	R	V	I	Q	M	V	L	D	S	L	R	Y	W	V	T	.	.	.	E	M	H	V	D	G	F	R	F
Template Known Secondary structure						S			T	T		S	S	S		B		S	S						S	T	T	T	B				T	T								S	S	S	S	S			B		T	T	S																	.	.	.	T	T
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions