Job Description P39305 Confidence 65.47% Date Thu Jan 5 11:59:09 GMT 2012 Rank 218 Aligned Residues 128 % Identity 11% Template c2pljA_ PDB info PDB header:lyase Chain: A: PDB Molecule:lysine/ornithine decarboxylase; PDBTitle: crystal structure of lysine/ornithine decarboxylase complexed with2 putrescine from vibrio vulnificus Resolution 1.70 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M
Query Conservation
Alig confidence																									.	.	.	.																																						.	.	.	.
Template Conservation																									.	.	.	.																																						.	.	.	.
Template Sequence		N	L	N	E	L	E	K	F	K	A	Y	R	D	D	V	E	L	L	V	R	L	S	F	.	.	.	.	S	K	K	F	G	C	S	P	E	Q	A	L	V	I	I	E	T	A	K	E	W	N	I	R	I	K	G	L	S	F	H	V	G	S	Q	T	T	.	.	.	.	N	P	N	K	Y	V	E	A	I	H	T	C
Template Known Secondary structure		S						T	T	G	G	G	T	T	T							B			.	.	.	.				S		B															T	T												T	T			.	.	.	.		T
Template Predicted Secondary structure																									.	.	.	.																																						.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		R	K	A	I	Q	F	A	Q	D	V	G	I	.	.	.	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I
Query Conservation														.	.	.
Alig confidence														.	.	.																																			.
Template Conservation																																																			.
Template Sequence		R	H	V	M	E	Q	V	V	E	R	G	L	P	A	L	S	T	L	D	I	G	G	G	F	P	V	N	Y	T	Q	Q	V	M	P	I	D	Q	F	C	A	P	I	N	E	A	L	S	L	L	.	P	E	T	V	H	V	L	A	E	P
Template Known Secondary structure											T	T																	S	S	S																	T	T	S	.		T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions