Return to main results Retrieve Phyre Job Id

Job DescriptionP39305
Confidence60.39%DateThu Jan 5 11:59:09 GMT 2012
Rank254Aligned Residues138
% Identity12%Templatec2p10D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:mll9387 protein; PDBTitle: crystal structure of a putative phosphonopyruvate hydrolase (mll9387)2 from mesorhizobium loti maff303099 at 2.15 a resolution
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50........ .60.........70
Predicted Secondary structure 
























.............


Query SS confidence 






















































. . . . . . . . . . . . .











Query Sequence  KQIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLNWSREQRL. . . . . . . . . . . . . ALVNAIVETGVR
Query Conservation      


         
  
 
  
   
   


                    .............         

 
Alig confidence 

































.......













.............











Template Conservation 

 





 
 

  
    

 
   




 .......





 


  
  

  
 

  





 

   

Template Sequence  RHTPVLAGVNGTDPFXVXSTFLRELKEIGFAGVQ. . . . . . . NFPTVGLIDGLFRQNLEETGXSYAQEVEXIAEAHKLDLL
Template Known Secondary structure  SSS

TT
TT

T
S.......
S
GGG

TT

TT
Template Predicted Secondary structure 


















.......















Template SS confidence 















































































   92.......100.........110.........120..... ....130.........140.........150.........160....
 
   71........80.........90.........100.........110.........120.........130.........140.........150
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  VPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQV
Query Conservation 
            
   
   
          
  
  

   
                       
  
   
   

Alig confidence 






......................
























.....




















Template Conservation 





 ...................... 


  
 







 
 
 
 

.....
 
 
      
  

   
 
Template Sequence  TTPYVFS. . . . . . . . . . . . . . . . . . . . . . PEDAVAXAKAGADILVCHXGLTTGK. . . . . SXDDCVSLINECIEAARTIRD
Template Known Secondary structure 


S......................T
S
SS



.....

T
Template Predicted Secondary structure 

......................










.....


Template SS confidence 















































































   165....170. ........180.........190...... ...200.........210.......
 
   151........160.........170......
Predicted Secondary structure 










Query SS confidence 

























Query Sequence  TLAMEIMDYPLMSSISKALGYAHYLN
Query Conservation   
  
               
     
Alig confidence 










.













Template Conservation 


 
  



.  
 
    
    
Template Sequence  DIIILSHGGPI. ANPEDARFILDSCQ
Template Known Secondary structure  T
BTTB.
S
T
Template Predicted Secondary structure 




.




Template SS confidence 

























   226...230...... ...240.........250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions