Job Description P39305 Confidence 99.87% Date Thu Jan 5 11:59:09 GMT 2012 Rank 36 Aligned Residues 237 % Identity 20% Template c2i56A_ PDB info PDB header:isomerase, metal-binding protein Chain: A: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase from pseudomonas2 stutzeri with l-rhamnose Resolution 1.97 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.											.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	.	.	.	.	.	.	.	.	.	.	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V
Query Conservation																																									.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	A	T	P	N	V	S	L	H	I	P	W	D	K	A	D	P	K	E	L	K	A	R	G	D	A	L	G	L	G	F	D	A	M	N	S	N	T	F	S	D	A	P	G	Q	A	H	S	Y	K	Y	G	S	L	S	H	T	N	A	A	T	R	A	Q	A	V	E	H	N	L	E	C	I	E	I	G	K	A	I
Template Known Secondary structure			S								B	T	T	T	T		S													T											S	S			T	T		S	S			T	T		S	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																					.	.	.	.	.	.
Query SS confidence																	.	.	.	.																																					.	.	.	.	.	.
Query Sequence		G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	.	.	.	.	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	.	.	.	.	.	.	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W
Query Conservation																	.	.	.	.																																					.	.	.	.	.	.
Alig confidence												.					.	.	.	.																					.																.	.	.	.	.	.																	.
Template Conservation												.																													.																																						.
Template Sequence		G	S	K	A	L	T	V	W	I	G	.	D	G	S	N	F	P	G	Q	S	N	F	T	R	A	F	E	R	Y	L	S	A	M	A	E	I	Y	K	G	.	L	P	D	D	W	K	L	F	S	E	H	K	M	Y	E	P	A	F	Y	S	T	V	V	Q	D	W	G	T	N	Y	L	I	A	Q	T	L	G	.	P	K
Template Known Secondary structure		T										.				S	S	T	T	S	S																			T	.			T	T									S	S	S	S		S	S			T	T		S													.	T	T
Template Predicted Secondary structure												.																													.																																						.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.							.	.	250
Predicted Secondary structure																											.	.																											.																		.	.	.	.	.	.
Query SS confidence																											.	.																											.																		.	.	.	.	.	.
Query Sequence		F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	.	.	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	V	P	F	G	E	G	V	V	.	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	.	.	.	.	.	.	Y	L	I
Query Conservation																											.	.																											.																		.	.	.	.	.	.
Alig confidence											.																.	.														.													.																		.	.	.	.	.	.
Template Conservation											.																															.
Template Sequence		A	Q	C	L	V	D	L	G	H	.	H	A	P	N	T	N	I	E	M	I	V	A	R	L	I	Q	F	G	K	L	G	G	F	H	F	N	D	S	K	Y	.	G	D	D	D	L	D	A	G	A	I	E	P	Y	R	L	F	L	V	F	N	E	L	V	D	A	E	A	R	G	V	K	G	F	H	P	A	H	M	I
Template Known Secondary structure								G	G	G	.	S		T	T													T	T									B		S	S	.	S	S			B		T	T	S	S																		T	T		T	T
Template Predicted Secondary structure											.																															.
Template SS confidence
		249	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	W	S	E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K	A	G	M	V	E
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		D	Q	S	.	H	N	V	T	D	P	I	E	S	L	I	N	S	A	N	E	I	R	R	A	Y	A	Q	A	L	L	V	D
Template Known Secondary structure					.		S	S	S																							S
Template Predicted Secondary structure					.
Template SS confidence
		327	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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