Job Description P39305 Confidence 31.39% Date Thu Jan 5 11:59:09 GMT 2012 Rank 363 Aligned Residues 127 % Identity 17% Template c2e8yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amyx protein; PDBTitle: crystal structure of pullulanase type i from bacillus subtilis str.2 168 Resolution 2.11 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		L	G	I	Y	E	K	A	L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	.	.	.	.	.	.	.	.	.	R	E	Q	R	L
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	L	T	E	T	D	T	Q	T	A	N	G	S	S	S	G	L	A	Y	V	K	E	L	G	V	T	H	V	E	L	L	P	V	N	D	F	A	G	V	D	E	E	K	P	L	D	A	Y	N	W	G	Y	N	P	L	H	F	F	A	P	E	G	S	Y	A	S	N	P	H	D	P	Q	T	R	K	T	E	L	K
Template Known Secondary structure		G	G	G	G		T	T		B		T	T	S		B										T		S					S						S	S	S		T	T	S	G	G	G							S									S	T	T	S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.																																.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		Q	M	I	N	T	L	H	Q	H	G	L	R	V	I	L	D	V	V	F	N	H	V	Y	K	R	E	N	S	P	F	E	K	T	V	P	G	Y	F	F	R	H	D	E	C	G	K	P	S	N	G	T	G	V	G	N	D	I	A	S	E	R	R	M	A	R	K	F	I	A	D	C	V	V	Y	W	L	E	.	.	.
Template Known Secondary structure										T	T									T	T			S	S	G	G	G	S						S	T	T	T	S	B		B		T	T	S	S	B			T	T	S	S	S			B		T	T	S																	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		E	Y	N	V	D	G	F	R	F	D	L	L	G	I	L	D	.	.	.	.	I	D	T	V	L	Y	M	K	E	K	A	T	K	A
Template Known Secondary structure											T	T	G	G	G	S	B	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.					.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions