Job Description P39305 Confidence 88.12% Date Thu Jan 5 11:59:09 GMT 2012 Rank 91 Aligned Residues 115 % Identity 11% Template c2dh3A_ PDB info PDB header:transport protein, signaling protein Chain: A: PDB Molecule:4f2 cell-surface antigen heavy chain; PDBTitle: crystal structure of human ed-4f2hc Resolution 2.80 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.											.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	.	.	.	.	.	.	.	.	.	.	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	.	.	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D
Query Conservation																												.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation
Template Sequence		L	K	G	R	L	D	Y	L	S	S	L	K	V	K	G	L	V	L	G	P	I	H	K	N	Q	K	D	D	V	A	Q	T	D	L	L	Q	I	D	P	N	F	G	S	K	E	D	F	D	S	L	L	Q	S	A	K	K	K	S	I	R	V	I	L	D	L	T	P	N	Y	R	G	E	N	S	W	F	S	T	Q	V
Template Known Secondary structure			G	G	G						T	T	T														T	T		S	T	T								T	T	T																T	T									T	T	T	T	S	S	S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S
Query Conservation
Alig confidence																	.	.	.	.													.	.
Template Conservation																	.	.	.	.													.	.
Template Sequence		D	T	V	A	T	K	V	K	D	A	L	E	F	W	L	.	.	.	.	Q	A	G	V	D	G	F	Q	V	R	D	I	.	.	E	N	L	K	D	A	S	S	F	L	A	E	W	Q	N	I	T	K	G	F
Template Known Secondary structure		T															.	.	.	.		T	T									G	.	.	G	G	S	T	T
Template Predicted Secondary structure																	.	.	.	.													.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions