Job Description P39305 Confidence 84.92% Date Thu Jan 5 11:59:09 GMT 2012 Rank 113 Aligned Residues 106 % Identity 5% Template c2d2rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of helicobacter pylori undecaprenyl pyrophosphate2 synthase Resolution 1.88 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y
Query Conservation
Alig confidence																														.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.
Template Sequence		H	K	K	G	V	K	T	L	K	D	I	T	I	W	C	A	N	H	K	L	E	C	L	T	L	Y	A	F	.	.	.	.	.	.	E	V	D	F	L	M	K	M	L	K	K	Y	L	K	D	E	R	S	T	Y	L	D	N	N	I	R	F	R	A	I	G	D	L	E	G	F	S	K	E	L	R	D	T	I	L	Q
Template Known Secondary structure																		T	T	T		S								.	.	.	.	.	.																							T	T							S		G	G	G	S
Template Predicted Secondary structure																														.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	Y	L	N	N	P	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	N	D	T	R	H	F	K	D	F	T	Q	V	L	A	L	N	Y	G	S	K	N	E	L	S	R	A	F	K	S	L
Template Known Secondary structure							T	T			S								S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions