Return to main results Retrieve Phyre Job Id

Job DescriptionP39305
Confidence39.43%DateThu Jan 5 11:59:09 GMT 2012
Rank326Aligned Residues118
% Identity19%Templatec2cbjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hyaluronidase; PDBTitle: structure of the clostridium perfringens nagj family 842 glycoside hydrolase, a homologue of human o-glcnacase in3 complex with pugnac
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40..... ....50.........60.........70.. .......
Predicted Secondary structure 













........










.



Query SS confidence 




































. . . . . . . .


























.






Query Sequence  GIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDD. . . . . . . . RLSRLNWSREQRLALVNAIVETGVRVP. SMCLSAH
Query Conservation 

         
  
 
  
   
   


       ........                      

 
 .       
Alig confidence 




































........


























.






Template Conservation    





 


 
 
  
  
    


 







  

  


 

  
   
  
        
 

 




  
Template Sequence  GIVEGFYGTPWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAENKVDFVFGISPGID
Template Known Secondary structure 

SSS


TT



TT
TTTTTTTTS


TTTT


TTT
Template Predicted Secondary structure 






























Template SS confidence 















































































   183......190.........200.........210.........220.........230.........240.........250.........260..
 
   80.........90.........100.........110.........120.........130.
Predicted Secondary structure 






















Query SS confidence 



















































Query Sequence  RRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETR
Query Conservation      
   
   
          
  
  

   
                 
Alig confidence 


.....











































Template Conservation 
  .....       
   
  
  

   


 
 

 


          
Template Sequence  IRF. . . . . DGDAGEEDFNHLITKAESLYDMGVRSFAIYWDDIQDKSAAKHAQ
Template Known Secondary structure 


.....STTT


TT
S


Template Predicted Secondary structure 


.....













Template SS confidence 



















































   263.. ....270.........280.........290.........300.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions