Job Description P39305 Confidence 95.53% Date Thu Jan 5 11:59:09 GMT 2012 Rank 55 Aligned Residues 145 % Identity 16% Template c1xc6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-galactosidase; PDBTitle: native structure of beta-galactosidase from penicillium sp. in complex2 with galactose Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	.	.	.	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.																		.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.
Template Sequence		L	P	V	A	S	L	Y	I	D	I	F	E	K	V	K	A	L	G	F	N	C	V	S	F	Y	V	D	W	A	L	L	E	G	N	P	G	H	Y	S	A	E	G	I	F	D	L	Q	P	F	F	D	A	A	K	E	A	G	I	Y	L	L	.	A	R	P	G	P	Y	I	N	A	E	V	S	G	G	G	F	P	G
Template Known Secondary structure		S			G	G	G										T	T	T															S	B	T	T	B					G	G	G		S											T					.					S				T	T	B	G	G	G	G			G
Template Predicted Secondary structure																																																															.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.																															.	.	.	.
Query SS confidence		.	.	.	.																															.	.	.	.
Query Sequence		.	.	.	.	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	.	.	.	.	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T
Query Conservation		.	.	.	.																															.	.	.	.
Alig confidence		.	.	.	.																															.	.	.	.
Template Conservation
Template Sequence		W	L	Q	R	V	D	G	I	L	R	T	S	D	E	A	Y	L	K	A	T	D	N	Y	A	S	N	I	A	A	T	I	A	K	A	Q	I	T	N	G	G	P	I	I	L	Y	Q	P	E	N	E	Y	S	G	A	C	C	G	Y	N	G	F	P	D	G	S	Y	M	Q	Y	I	E	D	H	A	R	D	A	G	I	V
Template Known Secondary structure		G	G	G	G		S	S		T	T	S	S																						T	B	G	G	G	T	S	S							S	S					B		T	T					S															T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		152	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	M	E	I	M	D	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	F	I	S	N	D	A	W
Template Known Secondary structure		S		B	B			B	S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions