Job Description P39305 Confidence 56.04% Date Thu Jan 5 11:59:09 GMT 2012 Rank 274 Aligned Residues 126 % Identity 12% Template c1tj2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:bifunctional puta protein; PDBTitle: crystal structure of e. coli puta proline dehydrogenase domain2 (residues 86-669) complexed with acetate Resolution 2.05 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.								.	.	.	.	.				.	120	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.						.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.						.	.	.
Query Sequence		S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	.	.	.	.	.	.	.	I	Q	L	A	G	.	.	.	Y	D	V	Y
Query Conservation																																																															.	.	.	.	.	.	.						.	.	.
Alig confidence																												.	.	.	.	.	.																														.	.	.	.	.	.	.						.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		T	I	A	E	A	L	A	N	A	R	K	L	E	E	K	G	F	R	Y	S	Y	D	M	L	G	E	.	.	.	.	.	.	A	A	L	T	A	A	D	A	Q	A	Y	M	V	S	Y	Q	Q	A	I	H	A	I	G	K	A	S	N	G	R	G	I	Y	E	G	P	G	I	S	I	K	L	S	A	L	H	P	R	Y
Template Known Secondary structure		S							T						T	T	T											.	.	.	.	.	.				S																							T	T						S							G	G	G	T	S	T	T	G
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																											.												.	.	.
Query SS confidence																																											.												.	.	.
Query Sequence		Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	S	.	S	I	S	K	A	L	G	Y	A	H	Y	.	.	.	L	N	N	P	W	F	Q	L	Y	P
Query Conservation																																											.												.	.	.
Alig confidence																																											.												.	.	.
Template Conservation
Template Sequence		S	R	A	Q	Y	D	R	V	M	E	E	L	Y	P	R	L	K	S	L	T	L	L	A	R	Q	Y	D	I	G	I	N	I	D	A	E	E	S	D	R	L	E	I	S	L	D	L	L	E	K	L	C	F	E	P	E	L	A	G	W	N	G	I	G	F	V	I
Template Known Secondary structure		G	G																								T	T										G	G	G													T		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions