Job Description P39305 Confidence 94.88% Date Thu Jan 5 11:59:09 GMT 2012 Rank 59 Aligned Residues 206 % Identity 17% Template c1sr9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of leua from mycobacterium tuberculosis Resolution 2.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																						.	.	.																																					.	.	.	.
Query SS confidence																						.	.	.																																					.	.	.	.
Query Sequence		E	K	A	L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	.	.	.	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	.	.	.	.	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L
Query Conservation																						.	.	.																																					.	.	.	.
Alig confidence																						.	.	.									.	.	.	.	.	.	.	.	.																				.	.	.	.												.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Sequence		N	Q	A	L	I	D	P	X	S	P	A	R	K	R	R	X	F	D	L	L	V	R	X	G	Y	K	E	I	E	V	G	.	.	.	.	.	.	.	.	.	F	P	S	A	S	Q	T	D	F	D	F	V	R	E	I	I	E	Q	G	A	I	P	D	D	V	T	I	Q	V	L	T	Q	C	R	.	.	.	.	.	.
Template Known Secondary structure				T		S	S																		T		S						.	.	.	.	.	.	.	.	.		T	T	T														T	T		S		T	T									S		.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.										.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.																															.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.																															.	.	.	.	.
Query Sequence		G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	.	.	.	.	.	.	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	.	.	.	.	.	A	Q	V	T	L	A
Query Conservation																																			.	.	.	.	.	.																															.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																															.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	P	E	L	I	E	R	T	F	Q	A	C	S	G	A	P	R	A	I	V	H	F	Y	N	S	T	S	I	L	Q	R	R	V	V	F	R	A	N	R	A	E	V	Q	A	I	A	T	D	G	A	R	K	C	V	E	Q	A	A	K	Y	P	G	T	Q	W	R	F	E	Y	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.												T	T		S																		T	S																									S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.								.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																													.	.	.	.	.	.	.											.	.	.
Query SS confidence																												.	.	.	.	.	.																													.	.	.	.	.	.	.											.	.	.
Query Sequence		M	E	I	M	D	Y	P	L	M	S	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	.	.	.	.	.	.	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	G	H	I	.	.	.	.	.	.	.	V	A	V	H	V	K	D	T	K	P	.	.	.
Query Conservation																												.	.	.	.	.	.																													.	.	.	.	.	.	.											.	.	.
Alig confidence																												.	.	.	.	.	.												.	.																.	.	.	.	.	.	.											.	.	.
Template Conservation																																													.	.
Template Sequence		P	E	S	Y	T	G	T	E	L	E	Y	A	K	Q	V	C	D	A	V	G	E	V	I	A	P	T	P	E	R	P	I	I	F	N	L	P	A	T	V	E	X	T	T	.	.	P	N	V	Y	A	D	S	I	E	W	X	S	R	N	L	A	N	R	E	S	V	I	L	S	L	H	P	H	N	D	R	G	T	A	V
Template Known Secondary structure				T	G	G	G	S																			B	T	T	B									S	S			S		.	.															S	S	S	G	G	G								B		T	T	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
													218	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	G	V	F	K	N	V	P	F	G	E	.	.	.	.	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation
Template Sequence		A	A	A	E	L	G	F	A	A	G	A	D	R	I	E	G	C	L	F	G	N	G	E	R	T	G	N	V	C	L	V	T	L	G	L	N	L	F	S	R	G	V	D
Template Known Secondary structure										T	T							B	G	G	G		S	S	T	T		B		B										T	T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions