Job Description P39305 Confidence 62.74% Date Thu Jan 5 11:59:09 GMT 2012 Rank 235 Aligned Residues 128 % Identity 14% Template c1njjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:ornithine decarboxylase; PDBTitle: crystal structure determination of t. brucei ornithine2 decarboxylase bound to d-ornithine and to g418 Resolution 2.45 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M
Query Conservation
Alig confidence																									.	.	.	.	.																																					.	.	.	.
Template Conservation																									.	.	.	.	.																																					.	.	.	.
Template Sequence		C	V	D	E	L	E	K	V	A	K	T	H	P	K	A	K	M	V	L	R	I	S	T	.	.	.	.	.	V	K	F	G	A	K	V	E	D	C	R	F	I	L	E	Q	A	K	K	L	N	I	D	V	T	G	V	S	F	H	V	G	S	G	S	T	.	.	.	.	D	A	S	T	F	A	Q	A	I	S	D	S
Template Known Secondary structure		S												T	T							B			.	.	.	.	.			S		B		G	G	G											T	T												S			S	.	.	.	.		T
Template Predicted Secondary structure																									.	.	.	.	.																																					.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																				.																													.	.
Query SS confidence																				.																													.	.
Query Sequence		R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	.	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	.	.	S	R	A	Q	V	T	L	A	M	E	I
Query Conservation																				.																													.	.
Alig confidence																				.																													.	.
Template Conservation
Template Sequence		R	F	V	F	D	M	G	T	E	L	G	F	N	M	H	I	L	D	I	G	G	G	F	P	G	T	R	D	A	P	L	K	F	E	E	I	A	G	V	I	N	N	A	L	E	K	H	F	P	P	D	L	K	L	T	I	V	A	E	P
Template Known Secondary structure											T	T														S	S	T	T	S	S	S																	S				T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions