Job Description P39305 Confidence 88.51% Date Thu Jan 5 11:59:09 GMT 2012 Rank 89 Aligned Residues 132 % Identity 12% Template c1d7kB_ PDB info PDB header:lyase Chain: B: PDB Molecule:human ornithine decarboxylase; PDBTitle: crystal structure of human ornithine decarboxylase at 2.12 angstroms resolution Resolution 2.10 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	.	.	.	.	.	D	R	L	S	R	L	N	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																																								.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		S	E	V	E	L	M	K	V	A	R	A	H	P	K	A	K	L	V	L	R	I	A	T	D	D	S	K	A	V	C	R	L	S	V	K	F	G	A	T	L	R	T	S	R	L	L	L	E	R	A	K	E	L	N	I	D	V	V	G	V	S	F	H	V	G	S	G	C	T	.	.	.	.	D	P	E	T	F	V	Q
Template Known Secondary structure		S												T	T							B				S			S	S			S	S		S	S		B																T												S			S	.	.	.	.		T
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																				.	.
Query SS confidence																		.	.																																				.	.
Query Sequence		G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	.	.	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	.	.	S	R	A	Q	V	T	L	A	M	E	I
Query Conservation																		.	.																																				.	.
Alig confidence																		.	.										.																										.	.
Template Conservation																													.
Template Sequence		A	I	S	D	A	R	C	V	F	D	M	G	A	E	V	G	F	S	M	Y	L	L	D	I	G	G	G	.	F	P	G	S	E	D	V	K	L	K	F	E	E	I	T	G	V	I	N	P	A	L	D	K	Y	F	P	S	D	S	G	V	R	I	I	A	E	P
Template Known Secondary structure															T	T	T												.			S	S	S		S	S	S																	S		G	G	G
Template Predicted Secondary structure																													.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions