Job Description P31119 Confidence 100.00% Date Thu Jan 5 11:47:06 GMT 2012 Rank 19 Aligned Residues 449 % Identity 22% Template c3nyrA_ PDB info PDB header:ligase Chain: A: PDB Molecule:malonyl-coa ligase; PDBTitle: malonyl-coa ligase ternary product complex with malonyl-coa and amp2 bound Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	E	S	L	L	S	A	M	Y	R	F	G	A	G	K	K	C	V	E	D	V	N	F	T	P	D	S	Y	R	K	L	L	T	K	T	L	F	V	G	R	I	L	E	K	Y	S	V	E	G	E	R	I	G	L	M	L	P	N	A	G	I	S	A	A	V	I	F	G	A	I	A	R	R	R	M	P	A	M	M
Query Conservation
Alig confidence																							.																						.	.	.	.	.	.	.
Template Conservation																							.																						.	.	.	.	.	.	.
Template Sequence		L	F	P	A	L	S	P	A	P	T	G	A	P	A	D	R	P	A	L	R	F	.	G	E	R	S	L	T	Y	A	E	L	A	A	A	A	G	A	T	A	G	R	I	.	.	.	.	.	.	.	G	R	V	A	V	W	A	T	P	A	M	E	T	G	V	A	V	V	A	A	L	L	A	G	V	A	A	V	P	L
Template Known Secondary structure				T	T	T	S	S								T	S						.	T	T																		T		.	.	.	.	.	.	.									S	S														T
Template Predicted Secondary structure																							.																						.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.								.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	T	A	G	V	K	G	L	T	S	A	I	T	A	A	E	I	K	T	I	F	T	S	R	Q	F	L	D	K	G	K	L	W	H	L	P	E	Q	L	T	Q	V	R	W	V	Y	L	E	D	L	K	A	D	V	T	T	A	D	K	V	W	I	F	A	H	L	L	M	P	R	L	A	Q	V	K	Q	Q	P	E
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	K	S	G	D	K	E	L	A	H	I	L	S	D	S	A	P	S	L	V	L	A	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	E	L	P	P	A	L	G	A	L	E	R	V	D	V	D	V	R	A	R	G	A	V	P	E	D	G	A	D	D	G
Template Known Secondary structure			T	T																S						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					G	G	G	T	T	S							T	T												T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	L	I	L	F	T	S	G	S	E	G	H	P	K	G	V	V	H	S	H	K	S	I	L	A	N	V	E	Q	I	K	T	I	A	D	F	T	T	N	D	R	F	M	S	A	L	P	L	F	H	S	F	G	L	T	V	G	L	F	T	P	L	L	T	G	A	E	V	F	L	Y	P	S	P	L	H	Y	R
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		D	P	A	L	V	V	Y	T	S	G	T	T	G	P	P	K	G	A	V	I	P	R	R	A	L	A	T	T	L	D	A	L	A	D	A	W	Q	W	T	G	E	D	V	L	V	Q	G	L	P	L	F	H	V	H	G	L	V	L	G	I	L	G	P	L	R	R	G	G	S	V	R	H	L	G	R	.	F	S	T	E
Template Known Secondary structure		S										S	S	S	S																							T			T	T									T	T	S					T	T	T	T							T							S	S	.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470					.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		I	V	P	E	L	V	Y	D	R	S	C	T	V	L	F	G	T	S	T	F	L	G	H	Y	A	.	.	.	.	R	F	A	N	P	Y	D	F	Y	R	L	R	Y	V	V	A	G	A	E	K	L	Q	E	S	T	K	Q	L	W	Q	D	K	F	G	L	R	I	L	E	G	Y	G	V	T	E	C	A	P	V	V	S
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.
Template Conservation
Template Sequence		G	A	A	R	E	L	N	D	G	A	T	M	L	F	G	V	P	T	M	Y	H	R	I	A	E	T	L	P	A	D	P	E	L	A	K	A	L	A	G	A	R	L	L	V	S	G	S	A	A	L	P	V	H	D	H	E	R	I	A	A	A	T	G	R	R	V	I	E	R	Y	G	M	T	E	T	L	M	N	T	S
Template Known Secondary structure								T	T	T																		G	G	G												S						S	S															S										G	G	G
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.			.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		I	N	V	P	M	A	A	K	P	G	T	V	G	R	I	L	P	G	M	D	A	R	L	L	S	V	P	.	.	G	I	E	E	G	G	R	L	Q	L	K	G	P	N	I	M	N	G	Y	L	R	V	E	K	P	G	V	L	E	V	P	T	A	E	N	V	R	G	E	M	E	R	G	W	Y	D	T	G	D	I	V
Query Conservation																													.	.
Alig confidence																													.	.																															.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.
Template Sequence		V	R	A	D	G	E	P	R	A	G	T	V	G	V	P	L	P	G	V	E	L	R	L	V	P	I	A	A	L	D	G	E	S	V	G	E	I	Q	V	R	G	P	N	L	F	T	E	Y	L	N	R	P	D	A	T	A	A	A	F	.	.	.	.	.	.	.	.	.	T	E	D	G	F	F	R	T	G	D	M	A
Template Known Secondary structure				T	T	S				T	T							T	T													S										S	T	T	S					T	T								T	B	.	.	.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.										.	.	.	.	.	.	360	.	.	.	.	.
		600	.	.	.	.	.	.	.	.	.	610	.	.		.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.					.	.	.	.	.	.	.	.	670	.	.	.	.
Predicted Secondary structure															.																																																		.	.	.	.
Query SS confidence															.																																																		.	.	.	.
Query Sequence		R	F	D	E	Q	G	F	V	Q	I	Q	G	R	.	A	K	R	F	A	K	I	A	G	E	M	V	S	L	E	M	V	E	Q	L	A	L	G	V	S	P	D	K	V	H	A	T	A	I	K	S	D	A	S	K	G	E	A	L	V	L	F	T	T	.	.	.	.	D	N	E	L	T	R	D	K	L	Q	Q	Y	A
Query Conservation															.																																																		.	.	.	.
Alig confidence															.																																																		.	.	.	.
Template Conservation
Template Sequence		V	R	D	P	D	G	Y	V	R	I	V	G	R	K	A	T	D	L	I	K	S	G	G	Y	K	I	G	A	G	E	I	E	N	A	L	L	E	H	P	E	V	R	E	A	A	V	T	G	E	P	D	P	D	L	G	E	R	I	V	A	W	I	V	P	A	D	P	A	A	P	P	A	L	G	T	L	A	D	H	V
Template Known Secondary structure					T	T	S								S	S							T	T													T	T	S	T	T												T	T	T											S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	H	G	V	P	E	L	A	V	P	R	D	I	R	Y	L	K	Q	M	P	L
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		A	A	R	.	L	A	P	H	K	R	P	R	V	V	R	Y	L	D	A	V	P	R
Template Known Secondary structure					.	T		G	G	G	S		S						S
Template Predicted Secondary structure					.
Template SS confidence
		451	.	.		.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.