Job Description P31119 Confidence 100.00% Date Thu Jan 5 11:47:06 GMT 2012 Rank 9 Aligned Residues 494 % Identity 22% Template c3ni2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:4-coumarate:coa ligase; PDBTitle: crystal structures and enzymatic mechanisms of a populus tomentosa 4-2 coumarate:coa ligase Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		A	V	R	P	R	E	T	L	Y	E	S	L	L	S	A	M	Y	R	F	G	A	G	K	K	C	V	E	D	V	N	F	T	P	D	S	Y	R	K	L	L	T	K	T	L	F	V	G	R	I	L	E	K	.	Y	S	V	E	G	E	R	I	G	L	M	L	P	N	A	G	I	S	A	A	V	I	F	G	A	I	A
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		Y	I	P	K	N	L	P	L	H	S	Y	V	L	E	N	L	S	N	H	S	S	K	P	C	L	I	N	G	A	N	G	D	V	Y	T	Y	A	D	V	E	L	T	A	R	R	V	A	S	G	L	N	K	I	G	I	Q	Q	G	D	V	I	M	L	F	L	P	S	S	P	E	F	V	L	A	F	L	G	A	S	H
Template Known Secondary structure					S	S								T	T	T	G	G	G	S	T	T	S						T	T	T																							T	T			T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	R	M	P	A	M	M	N	Y	T	A	G	V	K	G	L	T	S	A	I	T	A	A	E	I	K	T	I	F	T	S	R	Q	F	L	D	K	G	K	L	W	H	L	P	E	Q	L	T	Q	V	R	W	V	Y	L	E	D	L	K	A	D	V	T	T	A	D	K	V	W	I	F	A	H	L	L	M	P	R	L
Query Conservation
Alig confidence																																																		.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		R	G	A	I	I	T	A	A	N	P	F	S	T	P	A	E	L	A	K	H	A	K	A	S	R	A	K	L	L	I	T	Q	A	C	Y	Y	E	K	V	K	D	F	A	R	E	S	D	V	.	.	.	.	.	.	K	V	M	C	V	D	S	A	P	D	G	C	L	H	F	S	E	L	T	Q	A	D	E	N	E	A
Template Known Secondary structure			T								T	T														T								G	G	G	T											T		.	.	.	.	.	.					S	S				T	T				T					T	S		G	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.					400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		A	Q	V	K	Q	Q	P	E	E	E	A	L	I	L	F	T	S	G	S	E	G	H	P	K	G	V	V	H	S	H	K	S	I	L	A	N	V	E	Q	I	K	T	.	.	.	.	I	A	D	F	T	T	N	D	R	F	M	S	A	L	P	L	F	H	S	F	G	L	T	V	G	L	F	T	P	L	L	T	G	A
Query Conservation																																												.	.	.	.
Alig confidence																																												.	.	.	.
Template Conservation
Template Sequence		P	Q	V	D	I	S	P	D	D	V	V	A	L	P	Y	S	S	G	T	T	G	L	P	K	G	V	M	L	T	H	K	G	L	I	T	S	V	A	Q	Q	V	D	G	D	N	P	N	L	Y	F	H	S	E	D	V	I	L	C	V	L	P	M	F	H	I	Y	A	L	N	S	I	M	L	C	G	L	R	V	G	A
Template Known Secondary structure								T	T	S									T	T	S	S	S																					S	S	S		S	S				T	T							S		T	T	S							T								T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.			.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.		.	.	.	.	.	.	510
Predicted Secondary structure																																									.	.																																.
Query SS confidence																																									.	.																																.
Query Sequence		E	V	F	L	Y	P	S	P	L	H	Y	R	I	V	P	E	L	V	Y	D	R	S	C	T	V	L	F	G	T	S	T	F	L	G	H	Y	A	R	F	.	.	A	N	P	Y	D	F	Y	R	L	R	Y	V	V	A	G	A	E	K	L	Q	E	S	T	K	Q	L	W	Q	D	K	F	.	G	L	R	I	L	E	G
Query Conservation																																									.	.																																.
Alig confidence									.																																.	.																																.
Template Conservation									.
Template Sequence		P	I	L	I	M	P	K	.	F	E	I	G	S	L	L	G	L	I	E	K	Y	K	V	S	I	A	P	V	V	P	P	V	M	M	S	I	A	K	S	P	D	L	D	K	H	D	L	S	S	L	R	M	I	K	S	G	G	A	P	L	G	K	E	L	E	D	T	V	R	A	K	F	P	Q	A	R	L	G	Q	G
Template Known Secondary structure							S	S	.														T																T		S		G	G	G	S			T	T								S	S															T	T	S
Template Predicted Secondary structure									.
Template SS confidence
		251	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		511	.	.	.	.	.	.	.	.	520	.	.	.	.						.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.						.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure																.	.	.	.	.																									.	.	.	.	.
Query SS confidence																.	.	.	.	.																									.	.	.	.	.
Query Sequence		Y	G	V	T	E	C	A	P	V	V	S	I	N	V	.	.	.	.	.	P	M	A	A	K	P	G	T	V	G	R	I	L	P	G	M	D	A	R	L	L	S	V	P	.	.	.	.	.	G	I	E	E	G	G	R	L	Q	L	K	G	P	N	I	M	N	G	Y	L	R	V	E	K	P	G	V	L	E	V	P	T
Query Conservation																.	.	.	.	.																									.	.	.	.	.
Alig confidence																.	.	.	.	.																									.	.	.	.	.																															.	.
Template Conservation																																																																																.	.
Template Sequence		Y	G	M	T	E	A	G	P	V	L	A	M	C	L	A	F	A	K	E	P	F	D	I	K	P	G	A	C	G	T	V	V	R	N	A	E	M	K	I	V	D	P	E	T	G	A	S	L	P	R	N	Q	P	G	E	I	C	I	R	G	D	Q	I	M	K	G	Y	L	N	D	P	E	A	T	S	R	T	I	.	.
Template Known Secondary structure					G	G	G	S	S						G	G	G	S	S	S						T	T							S	S								T	T	T			B			T	T									S	T	T	S		S			T	T									B	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	N	V	R	G	E	M	E	R	G	W	Y	D	T	G	D	I	V	R	F	D	E	Q	G	F	V	Q	I	Q	G	R	A	K	R	F	A	K	I	A	G	E	M	V	S	L	E	M	V	E	Q	L	A	L	G	V	S	P	D	K	V	H	A	T	A	I	K	S	D	A	S	K	G	E	A	L	V	L	F	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	D	K	E	G	W	L	H	T	G	D	I	G	Y	I	D	D	D	D	E	L	F	I	V	D	R	L	K	E	L	I	K	Y	K	G	F	Q	V	A	P	A	E	L	E	A	L	L	I	A	H	P	E	I	S	D	A	A	V	V	G	L	K	D	E	D	A	G	E	V	P	V	A	F	V
Template Known Secondary structure		.	.	.	.	.	.	.		T	T	S												T	T	S									S						T	T														T	S	T	T												T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		661	.	.	.				.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		T	D	N	E	.	.	.	L	T	R	D	K	L	Q	Q	Y	A	R	E	H	G	V	P	E	L	A	V	P	R	D	I	R	Y	L	K	Q	M	P	L	L	G	S	G	K	P	D	F	V	T	L	K	S
Query Conservation						.	.	.
Alig confidence						.	.	.														.
Template Conservation																						.
Template Sequence		V	K	S	E	K	S	Q	A	T	E	D	E	I	K	Q	Y	I	S	K	Q	.	V	I	F	Y	K	R	I	K	R	V	F	F	I	E	A	I	P	K	A	P	S	G	K	I	L	R	K	N	L	K	E
Template Known Secondary structure					T	T														T	T	.	S		G	G	G			S						S				B		T	T	S		B							T
Template Predicted Secondary structure																						.
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500		.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.