Return to main results Retrieve Phyre Job Id

Job DescriptionP31119
Confidence100.00%DateThu Jan 5 11:47:06 GMT 2012
Rank12Aligned Residues471
% Identity20%Templatec3iteB_
PDB info PDB header:ligaseChain: B: PDB Molecule:sidn siderophore synthetase; PDBTitle: the third adenylation domain of the fungal sidn non-2 ribosomal peptide synthetase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   207..210.........220......... 230.........240.........250.........260.........270.........280..
Predicted Secondary structure 






....















Query SS confidence 






















. . . .




















































Query Sequence  YESLLSAMYRFGAGKKCVEDVNF. . . . TPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRMP
Query Conservation      
              
  
....  


 

   
  

  
      

 
 
   

 
   
 

    
 
 
Alig confidence 






















....




















































Template Conservation          
   
   

           


 

       
  
   

 

 


   
  
     

    
   
Template Sequence  PSHYIETWAKTHPEWKAVEVATGFIVTEDWTYKKLNETANQVANLIIHASLHGRAIAVSLDRSLIAFAIIVGIXKSGNTY
Template Known Secondary structure  TT
TTS


TT
SS


S
TT
Template Predicted Secondary structure 





















Template SS confidence 















































































   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   283......290.........300.........310.........320.........330.........340.........350.........360..
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  AMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQ
Query Conservation 


        
   
       

                       
   
                           
Alig confidence 





































..............



























Template Conservation 
 
        
   
       

             ..............                            
Template Sequence  VPIEAGLPNDRKSFLLRDSRAAXAFVCDNNFDGVELPP. . . . . . . . . . . . . . ETKVLDTKNQSFIENLSTQDTSDILNNY
Template Known Secondary structure 

TTS
T
S
TTTTTT



T..............T
TT
TTS

S





Template Predicted Secondary structure 












..............

























Template SS confidence 















































































   102.......110.........120.........130......... 140.........150.........160.......
 
   363......370.........380.........390........ .400.........410.........420.........430....
Predicted Secondary structure 












........













Query SS confidence 



































. . . . . . . .



































Query Sequence  QPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIK. . . . . . . . TIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAE
Query Conservation     
 
 

 





 



  

  
        ........               
              
  
  
Alig confidence 












..




















........






















.











Template Conservation       
 
  


..

 
     
                              
           .            
Template Sequence  PENLDAYLLYTSG. . GTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHI. GEXFLAWRFGLC
Template Known Secondary structure 
TTS

..



GGGGG
TTT


S
TTST.TT
Template Predicted Secondary structure 






..





















.



Template SS confidence 















































































   168.170.........180 .........190.........200.........210.........220.........230.. .......240....
 
   435....440.........450.........460.........470.........480.........490.........500.........510....
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  VFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVT
Query Conservation   
              
    

     
     
          


 
  

  
            
  
   

 
Alig confidence 




































..








































Template Conservation                  
                 
  ..                                 
   

 
Template Sequence  AVTGERLSXLDDLPRTFRELGVTHAGIVPSLLDQTGL. . VPEDAPHLVYLGVGGEKXTPRTQQIWSSSDRVALVNVYGPT
Template Known Secondary structure 

TTT


T
..
GGGSTT

SS


TT
SS


G
Template Predicted Secondary structure 












..
























Template SS confidence 















































































   247..250.........260.........270.........280... ......290.........300.........310.........320....
 
   515....520... ......530.........540........ .550.........560.........570.........580........
Predicted Secondary structure 

.



















.....


























Query SS confidence 








.
























. . . . .







































Query Sequence  ECAPVVSIN. VPMAAKPGTVGRILPGMDARLLSVP. . . . . GIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEM
Query Conservation 
        .          
 
     
 
 
  .....  
  


 
 
  
  

    
 
              
Alig confidence 








.
























.....





























........

Template Conservation 
                                            


          
      
    ........  
Template Sequence  EVTIGCSAGRILPDSDTRCIGHPLGDSVAHVLAPGSNEHVKKGXAGELVIEGSLVANGYLNRPDAKGFCD. . . . . . . . IN
Template Known Secondary structure  GG
S
S

TTS
TT
TT

TTSS
B

TTSSTTS
SSS
TT


........T
Template Predicted Secondary structure 








































........

Template SS confidence 















































































   325....330.........340.........350.........360.........370.........380.........390.... ..
 
   589590.........600.........610.........620.........630.........640.........650.........660....
Predicted Secondary structure 






























....
Query SS confidence 











































































. . . .
Query Sequence  ERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNE. . . .
Query Conservation    

 





  
 

 
 
 

    

  
  
   


  
     
    
    
   

 

  
    ....
Alig confidence 




























...











































....
Template Conservation        


       
 
   

  
 
...   
   


  
     
    
                
       
Template Sequence  GRKXYRTGDIVRXDADSSILFLGRKDEQV. . . KQRLELGEVSEVIRSLSPTDIDVVTLLLFLVSFVASSGAAVRGELRNY
Template Known Secondary structure  T
TTS





...





SS


TT



S




Template Predicted Secondary structure 














...

















Template SS confidence 















































































   397..400.........410.........420..... ....430.........440.........450.........460.........470...
 
   665....670.........680.........690..... ....700........
Predicted Secondary structure  .
















.







Query SS confidence  .






























.












Query Sequence  . LTRDKLQQYAREHGVPELAVPRDIRYLKQMP. LLGSGKPDFVTLK
Query Conservation  .     
   
    
    

  
  
  

. 
  




  

Alig confidence  .












.
















.












Template Conservation        
   
   .
     
  
  
  

  
  


 
  

Template Sequence  KEINNSLRQACEQT. LPAYXVPDFIIPISFIPLRDTSAKTDAKALE
Template Known Secondary structure  TTT.S
GGGS
S

S


B
TTSSSB
Template Predicted Secondary structure 


.



















Template SS confidence 













































   489490.........500.. .......510.........520.........530...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions