Job Description P31119 Confidence 100.00% Date Thu Jan 5 11:47:06 GMT 2012 Rank 16 Aligned Residues 474 % Identity 20% Template c2v7bB_ PDB info PDB header:ligase Chain: B: PDB Molecule:benzoate-coenzyme a ligase; PDBTitle: crystal structures of a benzoate coa ligase from2 burkholderia xenovorans lb400 Resolution 1.84 Å

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		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		T	L	Y	E	S	L	L	S	A	M	Y	R	F	G	A	G	K	K	C	V	E	D	V	N	F	T	P	D	S	Y	R	K	L	L	T	K	T	L	F	V	G	R	I	L	E	K	.	Y	S	V	E	G	E	R	I	G	L	M	L	P	N	A	G	I	S	A	A	V	I	F	G	A	I	A	R	R	R	M	P	A
Query Conservation																																																.
Alig confidence																							.	.																								.
Template Conservation																							.	.
Template Sequence		N	F	A	A	Y	L	F	R	L	N	E	T	R	A	G	K	T	A	Y	I	D	.	.	D	T	G	S	T	T	Y	G	E	L	E	E	R	A	R	R	F	A	S	A	L	R	T	L	G	V	H	P	E	E	R	I	L	L	V	M	L	D	T	V	A	L	P	V	A	F	L	G	A	L	Y	A	G	V	V	P	V
Template Known Secondary structure											T	G	G	G	T	T	S						.	.	S	S																						T	T			T	T									S	S	T													T
Template Predicted Secondary structure																							.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	N	Y	T	A	G	V	K	G	L	T	S	A	I	T	A	A	E	I	K	T	I	F	T	S	R	Q	F	L	D	K	G	K	L	W	H	L	P	E	Q	L	T	Q	V	R	W	V	Y	L	E	D	L	K	A	D	V	T	T	A	D	K	V	W	I	F	A	H	L	L	M	P	R	L	A	Q	V	K	Q	Q
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	N	T	L	L	T	P	A	D	Y	V	Y	M	L	T	H	S	H	A	R	A	V	I	A	S	G	A	L	V	Q	N	V	T	Q	A	L	E	S	A	G	C	Q	L	I	V	S	Q	P	L	A	P	L	F	E	E	L	I	D	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	A	A	K
Template Known Secondary structure					T	T														T		S						G	G	G																								B								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.															.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		P	E	E	E	A	L	I	L	F	T	S	G	S	E	G	H	P	K	G	V	V	H	S	H	K	S	I	L	A	N	V	E	Q	I	K	T	.	I	A	D	F	T	T	N	D	R	F	M	S	A	L	P	L	F	H	S	F	G	L	T	V	G	L	F	T	P	L	L	T	G	A	E	V	F	L	Y	P	S	P	L
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		A	A	A	T	G	C	D	D	I	A	F	W	L	Y	S	K	P	K	G	T	V	H	T	H	A	N	L	Y	W	T	A	E	L	Y	A	K	P	I	L	G	I	A	E	N	D	V	V	F	S	A	A	K	L	F	F	A	Y	G	L	G	N	G	L	T	F	P	L	S	V	G	A	T	A	I	L	M	A	E	R	P
Template Known Secondary structure							T	T	S																										T									T	T						S	S		T	T	S								T							T								S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.			.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		H	Y	R	I	V	P	E	L	V	Y	D	R	S	C	T	V	L	F	G	T	S	T	F	L	G	H	Y	A	R	F	.	.	A	N	P	Y	D	F	Y	R	L	R	Y	V	V	A	G	A	E	K	L	Q	E	S	T	K	Q	L	W	Q	D	K	F	G	L	R	I	L	E	G	Y	G	V	T	E	C	A	P	V	V
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		T	A	D	A	I	F	A	R	L	V	E	H	R	P	T	V	F	Y	G	V	P	T	L	Y	A	N	M	L	V	S	P	N	L	P	A	R	A	D	V	A	I	R	I	C	T	S	A	G	E	A	L	P	R	E	I	G	E	R	F	T	A	H	F	G	C	E	I	L	D	G	I	G	S	T	E	M	L	H	I	F
Template Known Secondary structure													T			S														T		T	T				G	G	G										S	S															S										T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.					550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		S	I	N	V	P	M	A	A	K	P	G	T	V	G	R	I	L	P	G	M	D	A	R	L	L	S	V	P	G	.	.	.	.	I	E	E	G	G	R	L	Q	L	K	G	P	N	I	M	N	G	Y	L	R	V	E	K	P	G	V	L	E	V	P	T	A	E	N	V	R	G	E	M	E	R	G	W	Y	D	T	G
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	N	R	A	G	A	V	E	Y	G	T	T	G	R	P	V	P	G	Y	E	I	E	L	R	D	E	A	G	H	A	V	P	D	G	E	V	G	D	L	Y	I	K	G	P	S	A	A	V	M	Y	W	N	N	R	E	K	S	R	A	T	F	.	.	.	.	.	.	.	.	.	.	L	G	E	W	I	R	S	G
Template Known Secondary structure						T	T				T	T	S						T	T								T	T	S		B			T	T	S									T	T					B	T	T										.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.											.	.	.	.	.	.	410	.
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.						.	.	.	670	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		D	I	V	R	F	D	E	Q	G	F	V	Q	I	Q	G	R	A	K	R	F	A	K	I	A	G	E	M	V	S	L	E	M	V	E	Q	L	A	L	G	V	S	P	D	K	V	H	A	T	A	I	K	S	D	A	S	K	G	E	A	L	V	L	F	T	T	D	N	E	L	T	.	.	.	.	.	R	D	K	L	Q
Query Conservation																																																																								.	.	.	.	.
Alig confidence																								.	.	.	.																																													.	.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		D	K	Y	C	R	L	P	N	G	C	Y	V	Y	A	G	R	S	D	D	M	L	K	.	.	.	.	Y	V	S	P	V	E	V	E	M	V	L	V	Q	H	D	A	V	L	E	A	A	V	V	G	V	D	H	G	G	L	V	K	T	R	A	F	V	V	L	K	R	E	F	A	P	S	E	I	L	A	E	E	L	K
Template Known Secondary structure								T	T	S								G	G	G		B		.	.	.	.		B										T	T	S	T	T												T	T												T	T
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.					.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	A	R	E	H	G	V	P	E	L	A	V	P	R	D	I	R	Y	L	K	Q	M	P	L	L	G	S	G	K	P	D	F	V	T	L	K	S
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		A	F	V	K	D	R	.	L	A	P	H	K	Y	P	R	D	I	V	F	V	D	D	L	P	K	T	A	T	G	K	I	Q	R	F	K	L	R	E
Template Known Secondary structure						T	T	.	S		T	T	S	S		S						S				B		T	T	S		B
Template Predicted Secondary structure								.
Template SS confidence
		492	.	.	.	.	.		.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.