Job Description P31119 Confidence 11.48% Date Thu Jan 5 11:47:06 GMT 2012 Rank 100 Aligned Residues 256 % Identity 14% Template c2rkbE_ PDB info PDB header:lyase Chain: E: PDB Molecule:serine dehydratase-like; PDBTitle: serine dehydratase like-1 from human cancer cells Resolution 2.80 Å

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		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	L	F	V	G	R	I	L	E	K	Y	S	V	E	G	E	R	I	G	L	M	L	P	N	A	G	I	S	A	A	V	I	F	G	A	I	A	R	R	R	M	P	A	M	M	N	Y	T	A	G	V	K	G	L	T	S	A	I	T	A	A	E	I	K	T	I	F	T	S	R	Q	F	L	D	K	G	K	L	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	R	G	I	G	H	F	C	Q	E	M	A	K	K	G	C	R	H	L	V	C	S	S	G	G	N	A	G	I	A	A	A	Y	A	A	R	K	L	G	I	P	A	T	I	V	L	P	E	S	T	S	L	Q	V	V	Q	R	L	Q	G	E	G	A	E	V	Q	L	T	G	K	V	W	D	E	A	N	L	R	A
Template Known Secondary structure																T	T										S														T									T	T												T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.																.	380	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	L	P	E	Q	L	T	Q	V	R	W	V	Y	L	E	D	L	K	A	D	V	T	T	A	D	K	V	W	I	F	A	H	L	L	M	P	R	L	A	Q	V	K	Q	Q	P	E	E	E	A	L	I	L	F	T	S	G	S	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	K	G	V	V
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.
Template Sequence		Q	E	L	A	K	R	D	G	W	E	N	V	P	P	F	D	H	P	L	I	W	K	G	H	A	S	L	V	Q	E	L	K	A	V	L	.	.	.	.	.	.	.	.	.	R	T	P	P	G	A	L	V	L	A	V	G	G	G	G	L	L	A	G	V	V	A	G	L	L	E	V	G	W	Q	H	V	P	I	I	A
Template Known Secondary structure							S	T	T						S	S		S																		S	.	.	.	.	.	.	.	.	.	S	S			S							S	S	S														T		T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.										.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	H	K	S	I	L	A	N	V	E	Q	I	K	T	I	A	D	F	T	T	N	D	R	F	M	S	A	L	P	L	F	H	S	F	G	L	T	V	G	L	F	T	P	L	L	T	G	A	E	V	F	L	Y	P	S	P	L	H	Y	R	I	V	P	E	L	V	Y	D	R	S	C	T	V	L	F	G	T	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	T	H	G	A	H	C	F	N	A	A	I	T	A	G	K	L	V	T	L	P	D	I	T	S	V	A	K	S	L	G	A	K	T	V	A	A	R	A	L	E	C	M	Q	V	C	K	I	H	S	E	V	V	E	D	T	E	A	V	S	A	V	Q	Q	L	L	D	D	E	R	M	L	V	E	P	A	C	G	A
Template Known Secondary structure					T	T	B										T	S					S				S	S		G	G	G			S	S								G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		465	.										.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.
Query Sequence		F	L	.	.	.	.	.	.	.	.	.	G	H	Y	A	R	F	A	N	P	Y	D	F	Y	R	L	R	Y	V	V	A	G	A	E	K	L	Q	E	S	T	K	Q	L	W	Q	D	K	F	G
Query Conservation				.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	A	A	I	Y	S	G	L	L	R	R	L	Q	A	E	G	C	L	P	P	S	L	T	S	V	V	V	I	V	C	G	G	N	N	I	N	S	R	E	L	Q	A	L	K	T	H	L	G
Template Known Secondary structure								T	S								T	T	S	S		S	S		S								B		S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions