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Job DescriptionP96329
Confidence95.10%DateThu Jan 5 12:33:17 GMT 2012
Rank211Aligned Residues171
% Identity15%Templatec3gfoA_
PDB info PDB header:atp binding proteinChain: A: PDB Molecule:cobalt import atp-binding protein cbio 1; PDBTitle: structure of cbio1 from clostridium perfringens: part of2 the abc transporter complex cbionq.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
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Query Sequence  EASNVVGIEGAWGSGKTSLLNLILRNLALKKDAHTHVLHISPWLSGGSPVEALFLPVATVIQQEMEIRYPPKGFKKLWRK
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Template Sequence  KRGEVTAILGGNGVGKSTLFQNFNGILKPSSG. . RILFDNKPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFG
Template Known Secondary structure  TTS

TTSSTTSS

S..TT


SS
SSGGGT

SSB
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   30.........40.........50.........60. ........70.........80.........90.........100.......
 
   124.....130.........140.........150.........160.........170.........180.........190.........200...
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Query Sequence  YLLSPEAQKVIEYAQDTSSRVLPLVQYIGQFSSIINWIAGGIKVFSDSRLAVDQKTTTKLRAEIAGQLVSLDLKFIVVMD
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Template Sequence  AVNMKLPEDEIRKRVDNALKRTGIEHLKDKPTHCLSF. . . . . . . . . . . . . . . . . . . . . GQKKRVAIAGVLVMEPKVLILD
Template Known Secondary structure  TS


TT
GGGTTSBGGGS
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   108.110.........120.........130.........140.... .....150.........160......
 
   204.....210.........220.........230.......
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Query Sequence  . DLDRLEPSQVAEVFRLVRAVADLPRFTHILCYDR
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Template Sequence  EPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHD
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   167..170.........180.........190.........200.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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