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Job DescriptionP96329
Confidence96.46%DateThu Jan 5 12:33:17 GMT 2012
Rank108Aligned Residues154
% Identity19%Templatec3bgwD_
PDB info PDB header:replicationChain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase
Resolution3.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
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Query Sequence  EASNVVGIEGAWGSGKTSLLNLILRNLALKKDAHTHVLHISPWLSGGSPVEALFLPVATVIQQEMEIRYPPKGFKKLWRK
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Template Sequence  KRRNFVLIAARPSMGKTAFALKQAKNMSD. . . NDDVVNLHSLEMGKKENIKRL. . . . . . . . . . . . . . . . . . . . . . . . . . .
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   193......200.........210.........220. ........230.........240..
 
   124.....130.........140.........150.........160.........170.........180.........190..... ....200..
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Query Sequence  YLLSPEAQKVIEYAQDTSSRVLPLVQYIGQFSSIINWIAGGIKVFSDSRLAVDQKTTTKLRAEIAGQLVSLD. LKFIVVM
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Template Sequence  . . . . . . . . IVTAGSINAQKIKAARRDFASEDWGKLSMAIGEISNSNINIFDKAGQSVNYIWSKTRQTKRKNPGKRVIVMI
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TTGGGT

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   243......250.........260.........270.........280.........290.........300.........310....
 
   203......210.. .......220.........230.....
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Query Sequence  DDLDRLEPSQ. . . . . . . . VAEVFRLVRAVADLPRFTHILCY
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Template Sequence  DYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALS
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SSSSB
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T
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   315....320.........330.........340.........350.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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