Job Description P96329 Confidence 93.66% Date Thu Jan 5 12:33:17 GMT 2012 Rank 300 Aligned Residues 109 % Identity 17% Template c3a5dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:v-type atp synthase alpha chain; PDBTitle: inter-subunit interaction and quaternary rearrangement2 defined by the central stalk of prokaryotic v1-atpase Resolution 4.80 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	V	V	G	I	E	G	A	W	G	S	G	K	T	S	L	L	N	L	I	L	R	N	L	A	L	K	K	D	A	H	T	H	V	L	H	I	S	P	W	L	S	G	G	S	P	V	E	A	L	F	L	P	V	A	T	V	I	Q	Q	E	M	E	I	R	Y	P	P	K	G	F	K	K	L	W	R	K	Y	L
Query Conservation
Alig confidence																											.	.	.	.	.																	.	.	.	.	.																										.	.	.	.
Template Conservation																											.	.	.	.	.																	.	.	.	.	.																										.	.	.	.
Template Sequence		G	G	T	A	A	I	P	G	P	F	G	S	G	K	T	V	T	Q	Q	S	L	A	K	W	S	.	.	.	.	.	N	A	D	V	V	V	Y	V	G	C	G	E	R	G	N	E	.	.	.	.	.	M	T	D	V	L	V	E	F	P	E	L	T	D	P	K	T	G	G	P	L	M	H	R	T	V	.	.	.	.
Template Known Secondary structure		T								S	T	T	S	S												S	.	.	.	.	.	S		S								S			T	T	T	.	.	.	.	.	T					T	T	G	G	G				T	T	T	T			G	G	G	G			.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.																	.	.	.	.	.																										.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	P	E	A	Q	K	V	I	E	Y	A	Q	D	T	S	S	R	V	L	P	L	V	Q	Y	I	G	Q	F	S	S	I	I	N	W	I	A	G	G	I	K	V	F	S	D	S	R	L	A	V	D	Q	K	T	T	T	K	L	R	A	E	I	A	G	Q	L	V	S	L	D	L	K	F	I	V	V	M	D	D	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	A	N	T	S	N	M	P	V	A	A	R	E	A	S	I	Y	V	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	A	E	Y	F	R	D	Q	G	F	S	V	A	L	M	A	D	S	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.																										.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		206	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		328	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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