Return to main results Retrieve Phyre Job Id

Job DescriptionP96329
Confidence92.64%DateThu Jan 5 12:33:17 GMT 2012
Rank360Aligned Residues153
% Identity17%Templatec2vyeA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:replicative dna helicase; PDBTitle: crystal structure of the dnac-ssdna complex
Resolution4.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  EASNVVGIEGAWGSGKTSLLNLILRNLALKKDAHTHVLHISPWLSGGSPVEALFLPVATVIQQEMEIRYPPKGFKKLWRK
Query Conservation      



 
 






 

     
         

 



         
       
                  
Alig confidence 































..










...................................
Template Conservation    
 
  
 
  
 


      
   
    ..  

  
 
  ...................................
Template Sequence  QRSDLIIVAARPSVGKTAFALNIAQNVATKTN. . ENVAIFSLEMS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TT


STTTS
..SSSS
...................................
Template Predicted Secondary structure 










..




...................................
Template SS confidence 















































































   201........210.........220.........230.. .......240...
 
   124.....130.........140.........150.........160.........170.........180.........190.........200...
Predicted Secondary structure 






Query SS confidence 















































































Query Sequence  YLLSPEAQKVIEYAQDTSSRVLPLVQYIGQFSSIINWIAGGIKVFSDSRLAVDQKTTTKLRAEIAGQLVSLDLKFIVVMD
Query Conservation                                                              
  
   
      





Alig confidence  ..





































































.






Template Conservation  ..      
                                
      
              
        .  




Template Sequence  . . AQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESG. LGMVVID
Template Known Secondary structure  ..T

TT


TS



SS
BT
.
Template Predicted Secondary structure  ..


















.

Template SS confidence 















































































   244.....250.........260.........270.........280.........290.........300.........310... ......320
 
   204.....210 .........220.........230......
Predicted Secondary structure 





.........






Query SS confidence 






. . . . . . . . .

























Query Sequence  DLDRLEP. . . . . . . . . SQVAEVFRLVRAVADLPRFTHILCYD
Query Conservation 




  .........  
  

  

   
 







 
Alig confidence 






.........

























Template Conservation   
                       

 

    
 

   
Template Sequence  YLQLIQGSGRNRENRQQEVSEISRSLKALARELEVPVIALSQ
Template Known Secondary structure 
GGGSB

S

SS
TTS

Template Predicted Secondary structure 












Template SS confidence 









































   321........330.........340.........350.........360..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions