Job Description P96329 Confidence 96.60% Date Thu Jan 5 12:33:17 GMT 2012 Rank 98 Aligned Residues 161 % Identity 20% Template c2hydB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 Resolution 3.00 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	S	N	V	V	G	I	E	G	A	W	G	S	G	K	T	S	L	L	N	L	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	L	A	L	K	K	D	A	H	T	H	V	L	H	I	S	P	W	L	S	G	G	S	P	V	E	A	L	F	L	P	V	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.																								.	.	.
Template Conservation																																																				.	.	.	.																								.	.	.
Template Sequence		E	K	G	E	T	V	A	F	V	G	M	S	G	G	G	K	S	T	L	I	N	L	I	P	R	F	Y	D	V	T	S	G	Q	I	L	I	D	G	H	N	I	K	D	F	L	T	G	S	L	R	.	.	.	.	N	Q	I	G	L	V	Q	Q	D	N	I	L	F	S	D	T	V	K	E	N	I	L	L	.	.	.
Template Known Secondary structure			T	T								S	T	T	S	S						T	T	T	T	T	S	S			S							T	T			G	G	G	S							.	.	.	.		T						S	S					S	S	B						G	G	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.																								.	.	.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.					.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		T	V	I	Q	Q	E	M	E	I	R	Y	P	P	K	G	F	K	K	L	W	R	K	Y	L	L	S	P	E	A	Q	K	V	.	I	E	Y	A	Q	D	T	S	S	R	V	L	P	L	V	Q	Y	I	G	Q	F	S	S	I	I	N	W	I	A	G	G	I	K	V	F	S	D	S	R	L	A	V	D	Q	K	T	T
Query Conservation																																		.
Alig confidence		.	.	.	.	.	.																											.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	G	R	P	T	A	T	D	E	E	V	V	E	A	A	K	M	A	N	A	H	D	F	I	M	N	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	K	L	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	G		S	S													T	T							T	S	T	T	G	G	G		B			G	G	G	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		T	K	L	R	A	E	I	A	G	Q	L	V	S	L	D	L	K	F	I	V	V	M	D	D	.	.	.	.	L	D	R	L	E	P	S	Q	V	A	E	V	F	R	L	V	R	A	V	A	D	L	P	R	F	T	H	I	L	C	Y	D	R	Q	I	I	T	H	A	V	E	H	A	L	N	I	E	D	G	S
Query Conservation																										.	.	.	.
Alig confidence		.																								.	.	.	.			.	.	.																.	.
Template Conservation		.																														.	.	.																.	.
Template Sequence		.	G	Q	K	Q	R	L	S	I	A	R	I	F	L	N	N	P	P	I	L	I	L	D	E	A	T	S	A	L	D	.	.	.	L	E	S	E	S	I	I	Q	E	A	L	D	V	L	S	.	.	K	D	R	T	T	L	I	V	A	H	R	L	S	T	I	T	H	A	D	K	I	V	V	I	E	N	G	H
Template Known Secondary structure		.																	S						S	T	T	T	T			.	.	.															T	.	.	T	T	S							S	S	G	G	G	T	T	T		S							T	T
Template Predicted Secondary structure		.																														.	.	.																.	.
Template SS confidence
			481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.				510	.	.	.	.	.	.	.	.	.	520	.	.	.	.			.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions