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Job DescriptionP96329
Confidence98.35%DateThu Jan 5 12:33:17 GMT 2012
Rank15Aligned Residues214
% Identity14%Templatec2fnaA_
PDB info PDB header:atp-binding proteinChain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus2 solfataricus p2 at 2.00 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13. .....20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  LD. AAVEDVPEDRYGFGNIAENISRSILTLPLEASNVVGIEGAWGSGKTSLLNLILRNLALKKDAHTHVLHISPWLSGGS
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Template Sequence  FDTSPKDN. RKDFFDREKEIEKLKGLR. . . . . . . APITLVLGLRRTGKSSIIKIGINELN. . . . LPYIYLDLRKFEERNY
Template Known Secondary structure  T
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S.GGGS


T
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GGGGTT
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   3......10 .........20........ .30.........40.........50.... .....60.........70
 
   92.......100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  . PVEALFLPVATVIQQEMEIRYPPKGFKKLWRKYLLSPEAQKVIEYAQDTSSRVLPLVQYIGQFSSIINWIAGGIKVFSD
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Template Sequence  ISYKDFLLELQKEINKLVKRLPSLLKALKNI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QGIV
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TTTTTS.............................................TT
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   71........80.........90.........100. ....
 
   171........180.........190.........200.........210.........220.... .....230.........240.........
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Query Sequence  SRLAVDQKTTTKLRAEIAGQLVSLDLKFIVVMDDLDRLEPSQVAEVFRLVRAVA. DLPRFTHILCYDRQIITHAVEHALN
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Template Sequence  IXGNEIKFNRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVNLLPALAYAYDNLKRIKFIXSGSEXGLLYDYLRVED
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T
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TGGGGGG
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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   250.........260.........270.........280......
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Query Sequence  IEDGSRYLQKIIQLSFKLPRPEAFDLRNEFRQRAEAL
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Template Sequence  . . . PESPLFGRAFSTVELKPFSREEAIEFLRRGFQEA
Template Known Secondary structure  ...TTSTTTT






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   191........200.........210.........220....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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