Job Description P96329 Confidence 92.99% Date Thu Jan 5 12:33:17 GMT 2012 Rank 342 Aligned Residues 106 % Identity 16% Template c1skyE_ PDB info PDB header:atp synthase Chain: E: PDB Molecule:f1-atpase; PDBTitle: crystal structure of the nucleotide free alpha3beta3 sub-complex of2 f1-atpase from the thermophilic bacillus ps3 Resolution 3.20 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	N	V	V	G	I	E	G	A	W	G	S	G	K	T	S	L	L	N	L	I	L	R	N	L	A	L	K	K	D	A	H	T	H	V	L	H	I	S	P	W	L	S	G	G	S	P	V	E	A	L	F	L	P	V	A	T	V	I	Q	Q	E	M	E	I	R	Y	P	P	K	G	F	K	K	L	W	R	K	Y
Query Conservation
Alig confidence																																											.	.	.
Template Conservation																																											.	.	.
Template Sequence		K	G	G	K	I	G	L	F	G	G	A	G	V	G	K	T	V	L	I	Q	E	L	I	H	N	I	A	Q	E	H	G	G	I	S	V	F	A	G	V	G	E	.	.	.	R	T	R	E	G	N	D	L	Y	H	E	M	K	D	S	G	V	I	S	K	T	A	M	V	F	G	Q	M	N	E	P	P	G	A	R	M
Template Known Secondary structure		T	T									S	S	S																	T										S	S	.	.	.															T	S	G	G	G	G								T	T	S
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		L	L	S	P	E	A	Q	K	V	I	E	Y	A	Q	D	T	S	S	R	V	L	P	L	V	Q	Y	I	G	Q	F	S	S	I	I	N	W	I	A	G	G	I	K	V	F	S	D	S	R	L	A	V	D	Q	K	T	T	T	K	L	R	A	E	I	A	G	Q	L	V	.	S	L	D	L	K	F	I	V	V	M	D
Query Conservation																																																																						.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	A	L	T	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	M	A	E	Y	F	R	D	E	Q	G	Q	D	G	L	L	F	I	D
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.																																																							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		204	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	F	R
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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