Return to main results Retrieve Phyre Job Id

Job DescriptionP10805
Confidence85.19%DateThu Jan 5 11:32:20 GMT 2012
Rank147Aligned Residues40
% Identity13%Templatec3rh2A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:hypothetical tetr-like transcriptional regulator; PDBTitle: crystal structure of a hypothetical tetr-like transcriptional2 regulator (sama_0099) from shewanella amazonensis sb2b at 2.42 a3 resolution
Resolution2.42 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160.........170.........180....
Predicted Secondary structure 









Query SS confidence 







































Query Sequence  SSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPSLLKKKLK
Query Conservation            
        

  

     
   
 
 

Alig confidence 







































Template Conservation 
 

 

  

 
 
    
   

  



 



  
 
Template Sequence  DKIIQASLELFNEHGERTITTNHIAAHLDISPGNLYYHFR
Template Known Secondary structure 
GGG

T


S
Template Predicted Secondary structure 










Template SS confidence 







































   5....10.........20.........30.........40....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions