Return to main results Retrieve Phyre Job Id

Job DescriptionP10805
Confidence99.78%DateThu Jan 5 11:32:20 GMT 2012
Rank9Aligned Residues92
% Identity24%Templatec3lsgD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:two-component response regulator yesn; PDBTitle: the crystal structure of the c-terminal domain of the two-2 component response regulator yesn from fusobacterium3 nucleatum subsp. nucleatum atcc 25586
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160.. .......170.........180..... ....190.........200.........210.........220..
Predicted Secondary structure 




.




.









Query SS confidence 

















.






















.




































Query Sequence  SSVRDSVCRIIQSDIQHY. WNLRIVASSLCLSPSLLKKKLKN. ENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGY
Query Conservation            
       . 

  

     
   
 
 

 . 
 
   

   

  
  

  
  

 


   

Alig confidence 

















.






















.




































Template Conservation 
   
 
   
         
   

     
   
 
 
    
 
        
   
   
      
  

   

Template Sequence  SNAKELIQNIIEESYTDSQFTLSVLSEKLDLSSGYLSIXFKKNFGIPFQDYLLQKRXEKAKLLLLTTELKNYEIAEQVGF
Template Known Secondary structure 
TTTTSTT

T

SS




TT
Template Predicted Secondary structure 















Template SS confidence 















































































   151........160.........170.........180.........190.........200.........210.........220.........230
 
   223......230......
Predicted Secondary structure 


Query SS confidence 













Query Sequence  SSTSYFISVFKAFY
Query Conservation   
 
 


 


  
Alig confidence 













Template Conservation     
 
 
 

  
Template Sequence  EDVNYFITKFKKYY
Template Known Secondary structure  S
Template Predicted Secondary structure 


Template SS confidence 













   231........240....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions