Return to main results Retrieve Phyre Job Id

Job DescriptionP10805
Confidence94.71%DateThu Jan 5 11:32:20 GMT 2012
Rank15Aligned Residues50
% Identity12%Templatec3iwfA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcription regulator rpir family; PDBTitle: the crystal structure of the n-terminal domain of a rpir2 transcriptional regulator from staphylococcus epidermidis to 1.4a
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   149150.........160. ........170.........180........ .190........
Predicted Secondary structure 



..







.
Query SS confidence 












. .


























.









Query Sequence  DSVCRIIQSDIQH. . YWNLRIVASSLCLSPSLLKKKLKNENT. SYSQIVTECR
Query Conservation        
      ..  

  

     
   
 
 

  
 .
   

   
Alig confidence 












..


























.









Template Conservation    

 


         

 


    

 


 

 




 

 


  
 
Template Sequence  KKIAQFILNYPHKVVNXTSQEIANQLETSSTSIIRLSKKVTPGGFNELKTRLS
Template Known Secondary structure 
TT

TS
STT
Template Predicted Secondary structure 









Template SS confidence 




















































   20.........30.........40.........50.........60.........70..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions