 |
| Job Description | P10805 | | Confidence | 53.40% | Date | Thu Jan 5 11:32:20 GMT 2012 |
| Rank | 365 | Aligned Residues | 71 |
| % Identity | 11% | Template | c2oz6A_ |
| PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:virulence factor regulator; |
PDBTitle: crystal structure of virulence factor regulator from pseudomonas2 aeruginosa in complex with camp
|
| Resolution | 2.80 Å |
|
| | |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | | | | | | | | | | | |
|
|
|
| | | | | | | | | | | | | | |
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
| | | | | | | | |
|
|
| | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
A | E | L | T | R | A | L | L | F | T | V | L | S | N | F | L | E | Q | S | R | F | I | A | L | L | M | Y | I | L | R | S | S | V | R | D | S | V | C | R | I | I | Q | S | D | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
Q | H | Y | W | N | L | R | I | V | A | S | S | L | C | L | S | P | S | L | L | K | K | K | L | K | N |
| Query Conservation | |
| | | | | | |
| | | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| | | | | . | . | . | . | . | . | . | . | . | | | | |
|
| | |
|
| | | | | |
| | | |
| |
| |
|
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| | | | | | | | | | | | |
| | | | |
| | | |
|
| | |
|
| |
|
| |
|
|
|
| |
| | |
| Template Sequence | |
S | E | I | L | Y | T | L | G | S | Q | M | A | D | R | L | R | K | T | T | R | K | V | G | D | L | A | F | L | D | V | T | G | R | V | A | R | T | L | L | D | L | C | Q | Q | P | D | A | M | T | H | P | D | G | M | Q | I | K | I | T | R | Q | E | I | G | R | I | V | G | C | S | R | E | M | V | G | R | V | L | K | S |
| Template Known Secondary structure | |
| | | | | | | | | | | | | | | | | | | | | | | | | | |
|
| | | | | | | | | | | | | T | T | S | T | T |
|  | |  | T | T | | | | | |
|
| | | | | | | | | T | S |
| | | | | | | | | | |
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | | | | | | | | | | | | |
|
|
|
| | | | | | | | | | | | | | | | |
|
|
|
|
|
|
| | | | | |
|
| | | | | | | | |
|
|
| | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
