|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
L | E | L | Q | Q | L | K | K | T | Y | P | G | G | V | Q | A | L | R | G | I | D | L | Q | V | E | A | G | D | F | Y | A | L | L | G | P | N | G | A | G | K | S | T | T | I | G | I | I | S | S | L | V | N | K | T | S | G | R | V | S | V | F | G | Y | D | L | E | K | D | V | V | N | A | K | R | Q | L | G | L | V | P |
Query Conservation |   |
|   |
|   |
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|   |
|   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . |
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Template Conservation |   |
|   |
| . |   |   |   |
|   |   | . |
|   |   |   |
| . | . |
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|   |   |   |   |   | . |   |   |   |
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|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   | . |   |   |   |
|   |   |
|   |
Template Sequence |   |
L | K | V | . |
R | A | E | K | R | L | . |
G | N | F | R | L | . |
. |
N | V | D | F | E | M | G | R | D | . |
Y | C | V | L | L | G | P | T | G | A | G | K | S | V | F | L | E | L | I | A | G | I | V | K | P | D | R | G | E | V | R | L | N | G | A | D | I | T | P | L | P | P | E | . |
R | R | G | I | G | F | V | P |
Template Known Secondary structure |   |
 |  |  | . |  |  |  |  |  |  | . | T | T |  |  |  | . | . |  |  |  |  |  |  |
| S | S | . |  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  | T | S | S |
|
| S |  |  |  |  |  |  | T | T |  |  |
| T | T | S |
| T | T | . | T | S |
|
| B |
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|
Template Predicted Secondary structure |   |
 |  |  | . |  |  |  |  |  |  | . |
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|  |  |  | . | . |  |  |  |  |  |  |
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|  | . |  |  |  |  |  |
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| . |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
3 | . | . | |
. | . | . | . | 10 | . | |
. | . | . | . | . | |
|
. | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
Q | E | F | N | F | N | P | F | E | T | V | Q | Q | I | V | V | N | Q | A | G | Y | Y | G | V | E | R | K | E | A | Y | I | R | S | E | K | Y | L | K | Q | L | D | L | W | G | K | R | N | E | R | A | R | M | L | S | G | G | M | K | R | R | L | M | I | A | R | A | L | M | H | E | P | K | L | L | I | L | D | E | P | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
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|   |
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Alig confidence |   |
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| . | . |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |
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|   |
|
|   |   |   |
|   |
|   |
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|   |
Template Sequence |   |
Q | D | Y | A | L | F | P | H | L | S | V | Y | R | N | I | A | Y | G | L | R | . |
. |
N | V | E | R | V | E | R | D | R | R | V | R | E | M | A | E | K | L | G | I | A | H | L | L | D | R | K | P | A | R | L | S | G | G | E | R | Q | R | V | A | L | A | R | A | L | V | I | Q | P | R | L | L | L | L | D | E | P | L |
Template Known Secondary structure |   |
S | S |
|
|
|
| T | T | S |
|  |  |  |  |  |  | T | T |
| T | . | . | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| T | T | T | T | T |
|
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S | B |  |  |  | S | T | T |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  | . | . |  |
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|  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |
Query SS confidence |   |
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Query Sequence |   |
A | G | V | D | I | E | L | R | R | S | M | W | G | F | L | K | D | L | N | D | K | . |
G | T | T | I | I | L | T | T | H | Y | L | E | E | A | E | M | L | C | R | N | I | G | I | I | Q | H | G | E | L | V | E | N | T | S | M | K | A | L | L | A | K | L | K | S | E | T |
Query Conservation |   |
  |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   | . |
|   |
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|   |   |   |
|   |   |   |
|   |
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|   |
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|   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . |
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Template Conservation |   |
  |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
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|   |
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|   |   |   |   |
|   |   |   |   |
|   |
|   |
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|   |   |
|   |
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|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
S | A | V | D | L | K | T | K | G | V | L | M | E | E | L | R | F | V | Q | R | E | F | D | V | P | I | L | H | V | T | H | D | L | I | E | A | A | M | L | A | D | E | V | A | V | M | L | N | G | R | I | V | E | K | G | K | L | K | E | L | F | S | A | K | N | G | E | V |
Template Known Secondary structure |   |
S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  | S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|  |  |  |  |  |  | S |
|
| S | S |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |
Template SS confidence |   |
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  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
  |