Return to main results Retrieve Phyre Job Id

Job DescriptionP36879
Confidence100.00%DateThu Jan 5 11:53:55 GMT 2012
Rank33Aligned Residues224
% Identity26%Templatec3nhaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:atp-binding cassette sub-family b member 6, mitochondrial; PDBTitle: nucleotide binding domain of human abcb6 (adp mg bound structure)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70. ........
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Query Sequence  MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGYDLEK. DVVNAKRQ
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Template Sequence  QKGRIEFENVHFSY. ADRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSH
Template Known Secondary structure  SS


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   586...590......... 600.........610.........620.........630.........640.........650.........660....
 
   80.........90.........100.........110.........120.... .....130.........140.........150....
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Query Sequence  LGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQL. . . . . DLWGKRNERARMLSGGMKRRLMIARALMHE
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Template Sequence  IGVVPQDTVLFND. TIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKA
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   666...670........ .680.........690.........700.........710.........720.........730.........740....
 
   155....160.........170.........180.........190.........200.........210.........220........
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Query Sequence  PKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLK
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Template Sequence  PGIILLDEATSALDTSNERAIQASLAKVCA. NRTTIVVAHRLSTVV. NADQILVIKDGCIVERGRHEALLSRGG
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   745....750.........760.........770.... .....780......... 790.........800.........810......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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