Job Description P36879 Confidence 94.94% Date Thu Jan 5 11:53:55 GMT 2012 Rank 433 Aligned Residues 155 % Identity 15% Template c3llmB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase a; PDBTitle: crystal structure analysis of a rna helicase Resolution 2.80 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		V	E	A	G	D	F	Y	A	L	L	G	P	N	G	A	G	K	S	T	.	.	.	.	.	T	I	G	I	I	S	S	L	V	N	K	T	S	G	R	V	S	V	F	G	Y	D	L	E	K	D	V	V	N	A	K	R	Q	L	G	L	V	P	Q	E	F	N	F	N	P	F	E	T	V	Q	Q	I	V	V	N	Q
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.																			.	.	.	.
Template Conservation																																												.	.	.	.
Template Sequence		I	S	Q	N	S	V	V	I	I	R	G	A	T	G	C	G	K	T	T	Q	V	P	Q	F	I	L	D	D	F	I	Q	N	D	R	A	A	E	C	N	I	V	V	.	.	.	.	T	Q	P	R	R	I	S	A	V	S	V	A	E	R	V	A	F	E	R	G	E	E	P	G	K	S	C	G	Y	S	V	R	F	E
Template Known Secondary structure						S								T	T	S	S																T	T		G	G	G						.	.	.	.			S	S														T	T	T			T	T	S	S						T	T
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.					.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		A	G	Y	Y	G	V	E	R	K	E	A	Y	I	R	S	E	K	Y	L	K	Q	L	D	L	W	G	K	R	N	E	R	A	R	M	L	S	G	G	M	K	R	R	L	M	I	A	R	A	L	M	H	E	P	K	L	L	I	L	D	E	P	.	T	A	G	V	D	I	E	L	R	R	S	M	W	G	F	L	K	D
Query Conservation																																																															.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	L	P	R	P	H	A	S	I	X	F	C	T	V	G	V	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	L	E	A	G	I	R	G	I	S	H	V	I	V	D	E	I	H	E	R	D	I	N	T	D	F	L	L	V	V	L	R	D	V	V	Q
Template Known Secondary structure							S	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T									T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.																									.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
		182	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		L	N	D	K	G	T	T	I	I	L	T	.	T	H	Y	L	E	E	A	E	M	L	C	R	N	I	G	I	I	Q
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		A	Y	P	E	V	R	I	V	L	X	S	A	T	I	D	T	S	X	F	C	E	Y	F	F	N	C	P	I	I	E
Template Known Secondary structure				T	T	S							S	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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