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Job DescriptionP36879
Confidence96.92%DateThu Jan 5 11:53:55 GMT 2012
Rank166Aligned Residues147
% Identity16%Templatec3hr8A_
PDB info PDB header:recombinationChain: A: PDB Molecule:protein reca; PDBTitle: crystal structure of thermotoga maritima reca
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  VEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYG
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Template Sequence  YPRGRIVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALDPVYAKNLGVD. . . . . . . . . . . . . . . . LKSLLISQP
Template Known Secondary structure  TTSTTSSTT

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   58.60.........70.........80.........90.........100.........110.. .......120.
 
   108.110.........120.........130.........140.........150.........160. ........170.
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Query Sequence  VERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILD. . . . . . . . . . . . . . . . EPTAGVDIEL
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Template Sequence  DHGEQALEIVDELVRS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . GVVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARL
Template Known Secondary structure  SST.............................S

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   122.......130....... ..140.........150.........160.........170..
 
   172.......180..... ....190........ .200.........210.........
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Query Sequence  RRSMWGFLKDLNDK. GTTIILTTHYLEE. . . . . . . . . . . . . . . . AEMLCRNIGIIQHGELVENTS
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Template Sequence  MSQALRKIAGSVNKSKAVVIFTNQIRMKIGVMFGSPETTTGGLALKFYATMRMEVRRGEPIKEGK
Template Known Secondary structure  TSS
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   173......180.........190.........200.........210.........220.........230.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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