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Job DescriptionP36879
Confidence97.15%DateThu Jan 5 11:53:55 GMT 2012
Rank143Aligned Residues147
% Identity16%Templatec2zroA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:protein reca; PDBTitle: msreca adp form iv
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  VEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYG
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Template Sequence  LPRGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALD. PEYAKKLGVDTDSLLVSQPDT. . . . . . . . . . . . .
Template Known Secondary structure  TTSTTSSTT


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   58.60.........70.........80.........90.........100.. .......110.........120...
 
   108.110.........120.........130.........140.........150.........160....... ..170.
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Query Sequence  VERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGV. . . . . . . . . . . . . . . . DIEL
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Template Sequence  . . GEQALEIADMLVRS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . GALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARL
Template Known Secondary structure  ..TT.............................S

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   124.....130....... ..140.........150.........160.........170..
 
   172.......180..... ....190..... ....200.........210.........
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Query Sequence  RRSMWGFLKDLNDK. GTTIILTTHY. . . . . . . . . . LEEAEMLCRNIGIIQHGELVENTS
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Template Sequence  MSQALRKMTGALNNSGTTAIFINQLREKIGETTTGGKALKFYASVRLDVRRIETLKDGT
Template Known Secondary structure  T

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   173......180.........190.........200.........210.........220.........230.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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