Job Description P36879 Confidence 100.00% Date Thu Jan 5 11:53:55 GMT 2012 Rank 39 Aligned Residues 215 % Identity 27% Template c2yl4A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10 Resolution 2.85 Å

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		5	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure												.	.																																																										.
Query SS confidence												.	.																																																										.
Query Sequence		L	E	L	Q	Q	L	K	K	T	Y	.	.	P	G	G	V	Q	A	L	R	G	I	D	L	Q	V	E	A	G	D	F	Y	A	L	L	G	P	N	G	A	G	K	S	T	T	I	G	I	I	S	S	L	V	N	K	T	S	G	R	V	S	V	F	G	Y	D	L	E	K	.	D	V	V	N	A	K	R	Q	L	G
Query Conservation												.	.																																																										.
Alig confidence												.	.																																																										.
Template Conservation
Template Sequence		L	E	F	K	N	V	H	F	A	Y	P	A	R	P	E	V	P	I	F	Q	D	F	S	L	S	I	P	S	G	S	V	T	A	L	V	G	P	S	G	S	G	K	S	T	V	L	S	L	L	L	R	L	Y	D	P	A	S	G	T	I	S	L	D	G	H	D	I	R	Q	L	N	P	V	W	L	R	S	K	I	G
Template Known Secondary structure												S	S		T	T	S												T	T									T	T	S	S	S	T							T	T	S	S			S							T	T			T	T	T	B								S
Template Predicted Secondary structure
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.
Query Sequence		L	V	P	Q	E	F	N	F	N	P	F	E	T	V	Q	Q	I	V	V	N	Q	A	G	Y	Y	G	V	E	R	K	E	A	Y	I	R	S	E	K	Y	L	K	Q	.	.	.	.	.	.	.	.	L	D	L	W	G	K	R	N	E	R	A	R	M	L	S	G	G	M	K	R	R	L	M	I	A	R	A	L	M	H
Query Conservation																																												.	.	.	.	.	.	.	.
Alig confidence													.																															.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		T	V	S	Q	E	P	I	L	F	S	C	.	S	I	A	E	N	I	A	Y	G	A	D	D	P	S	S	V	T	A	E	E	I	Q	R	V	A	E	V	A	N	A	V	A	F	I	R	N	F	P	Q	G	F	N	T	V	V	G	E	K	G	V	L	L	S	G	G	Q	K	Q	R	I	A	I	A	R	A	L	L	K
Template Known Secondary structure					S	S					S	S	.	B							T	T	S	S	S	T	T	T	S												T	T							T	S	S	S	G	G	G		B		S	S	S	S
Template Predicted Secondary structure													.
Template SS confidence
		572	.	.	.	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	K	L	L	I	L	D	E	P	T	A	G	V	D	I	E	L	R	R	S	M	W	G	F	L	K	D	L	N	D	K	G	T	T	I	I	L	T	T	H	Y	L	E	E	A	E	M	L	C	R	N	I	G	I	I	Q	H	G	E	L	V	E	N	T	S	M	K	A
Query Conservation
Alig confidence																																.																		.
Template Conservation																																.																		.
Template Sequence		N	P	K	I	L	L	L	D	E	A	T	S	A	L	D	A	E	N	E	Y	L	V	Q	E	A	L	D	R	L	M	.	D	G	R	T	V	L	V	I	A	H	R	L	S	T	I	K	N	.	A	N	M	V	A	V	L	D	Q	G	K	I	T	E	Y	G	K	H	E	E
Template Known Secondary structure				S									S	S																		.	T	T	S															.	S	S							T	T								S
Template Predicted Secondary structure																																.																		.
Template SS confidence
		651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680		.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.		.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions