Job Description P36879 Confidence 100.00% Date Thu Jan 5 11:53:55 GMT 2012 Rank 57 Aligned Residues 209 % Identity 31% Template c2ygrD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:uvrabc system protein a; PDBTitle: mycobacterium tuberculosis uvra Resolution 3.40 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	G	I	D	L	Q	V	E	A	G	D	F	Y	A	L	L	G	P	N	G	A	G	K	S	T	T	I	G	.	.	I	I	S	S	L	V	N	K	T	S	G	R	V	S	V	F	G	Y	D	L	E	K	D	V	V	N	A	K	R	Q	L	G	L	V	P	Q	E	F	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	G	I	D	V	S	F	P	L	G	V	L	T	S	V	T	G	V	S	G	S	G	K	S	T	L	V	N	D	I	L	A	A	V	L	A	N	R	L	N	G	A	R	Q	V	P	G	R	H	T	R	V	T	G	L	D	Y	L	D	K	L	V	R	I	D	Q	S	P	I	G	R	T	P	R	S	N	P	A	T
Template Known Secondary structure				S							S	S	S							S	T	T	S	S								T									T	S								S	S						G	G	G										S		S		S	S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.
																																																				88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	N	P	F	E	T	V	Q	Q	I	V	V	N	Q	A	G	Y	Y	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	G	V	F	D	K	I	R	T	L	F	A	A	T	N	E	A	K	V	R	G	Y	K	P	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	T	G	D	G	T	I	K	I	E	M	N	F	L	P	D	V	Y	V	P	C	E	V	C	Q	G	A	R	Y	N	R	E	T	L	E	V	H	Y	K	G	K
Template Known Secondary structure				T											T	S					T	T	T			G	G	G	S		T	T	S	T	T	T	B		S	S	S	T	T	S	S							S	S	S								T	T	T	T	S		S	B						T			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		717	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.
																	107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																									.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																									.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	E	R	K	E	A	Y	I	R	S	E	K	Y	L	K	Q	L	D	L	W	G	K	R	.	N	E	R	A	R	M	L	S	G	G	M	K	R	R	L	M	I	A	R	A	L	M	H	E	.	.	.	P	K	L	L	I	L	D	E	P	T	A	G	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																									.	.	.
Template Conservation
Template Sequence		T	V	S	E	V	L	D	M	S	I	E	E	A	A	E	F	F	E	P	I	A	G	V	H	R	Y	L	R	T	L	V	D	V	G	L	G	Y	V	R	L	G	Q	P	A	P	T	L	S	G	G	E	A	Q	R	V	K	L	A	S	E	L	Q	K	R	S	T	G	R	T	V	Y	I	L	D	E	P	T	T	G	L
Template Known Secondary structure								T	S	B								S	T	T														S	S		S	S	S	B	T	T			G	G	G	S														S	S	S				S	S							S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		797	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		D	I	E	L	R	R	S	M	W	G	F	L	K	D	L	N	D	K	G	T	T	I	I	L	T	T	H	Y	L	E	E	A	E	M	L	C	R	N	I	G	I	I	.	.	.	.	.	.	Q	H	G	E	L	V	E	N	T	S	M	K	A	L	L	A	K	L	K	S	E
Query Conservation																																												.	.	.	.	.	.
Alig confidence																																				.								.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		H	F	D	D	I	R	K	L	L	N	V	I	N	G	L	V	D	K	G	N	T	V	I	V	I	E	H	N	L	D	V	I	K	T	.	S	D	W	I	I	D	L	G	P	E	G	G	A	G	G	G	T	V	V	A	Q	G	T	P	E	D	V	A	A	V	P	A	S	Y
Template Known Secondary structure																				T																.		S							S	S	S	T	T	S		S						S						T	T		S	S
Template Predicted Secondary structure																																				.
Template SS confidence
		877	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910		.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions