Job Description P36879 Confidence 100.00% Date Thu Jan 5 11:53:55 GMT 2012 Rank 55 Aligned Residues 248 % Identity 21% Template c2iw3B_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp Resolution 2.4 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	L	Q	Q	L	K	K	T	Y	P	G	G	V	Q	A	L	R	G	I	D	L	Q	V	E	A	G	D	F	Y	A	L	L	G	P	N	G	A	G	K	S	T	T	I	G	I	I	S	S	L	V	N	K	T	S	G	R	V	S	V	F	G	Y	D	L	E	K	D	V	V	N	A	K	R	Q	L	G	L	V	P
Query Conservation
Alig confidence												.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	C	N	C	E	F	S	L	A	Y	.	G	A	K	I	L	L	N	K	T	Q	L	R	L	K	R	A	R	R	Y	G	I	C	G	P	N	G	C	G	K	S	T	L	X	R	A	I	A	N	G	Q	V	D	G	F	P	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	E	E	C	R	T	V	Y	V	E	H
Template Known Secondary structure												.	T	T													T	T								S	T	T	S	S										T	T		S	T	T			.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	S					T	T
Template Predicted Secondary structure												.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.													.	.	.	.	.	490	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		Q	E	F	N	F	N	P	F	E	T	V	Q	Q	I	V	V	N	Q	A	G	Y	Y	G	V	E	R	K	E	A	Y	I	R	S	E	K	Y	L	K	Q	L	D	L	.	W	G	K	R	N	E	R	A	R	M	L	S	G	G	M	K	R	R	L	M	I	A	R	A	L	M	H	E	P	K	L	L	I	L	D	E	P
Query Conservation																																												.
Alig confidence																						.	.	.	.	.	.	.																.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		D	I	D	G	T	H	S	D	T	S	V	L	D	F	V	F	E	S	G	V	.	.	.	.	.	.	.	G	T	K	E	A	I	K	D	K	L	I	E	F	G	F	T	D	E	X	I	A	X	P	I	S	A	L	S	G	G	W	K	X	K	L	A	L	A	R	A	V	L	R	N	A	D	I	L	L	L	D	E	P
Template Known Secondary structure								T	T	S	B							T	T			.	.	.	.	.	.	.	S													T								S	B	G	G	G																	T	T		S						S	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.								.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																							.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	G	V	D	I	E	L	R	R	S	M	W	G	F	L	K	D	L	N	D	K	G	T	T	I	I	L	T	T	H	Y	L	E	E	A	E	M	L	C	R	N	I	G	I	I	Q	H	G	E	L	V	E	.	N	T	S	M	K	A	L	L	A	K	L	K	S	E	T	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.																																.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.
Template Sequence		T	N	H	L	D	T	V	N	V	A	W	L	V	N	Y	L	N	T	C	.	.	.	G	I	T	S	I	T	I	S	H	D	S	V	F	L	D	N	V	C	E	Y	I	I	N	Y	E	G	L	K	L	R	K	Y	K	G	N	F	T	E	F	V	K	K	C	P	A	A	K	A	Y	E	E	L	S	N	T	D	L	E
Template Known Secondary structure		T	T	T																S	.	.	.		S							S										S							T	T							S										G	G	G	G	G	T	T		S	S	G	G	G	G
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.				.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
																									232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	L	D	L	A	P	K	S	P	L	P	K	L	D	G	Y	Q	Y	R	L	V	D	T	A	T	L	E	V	E	V	L	R	E	Q	G	I	N	S	V	F	T	Q	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	F	P	E	P	G	Y	L	E	G	V	K	T	K	Q	K	A	I	V	K	V	T	N	X	E	F	Q	Y	P	G	T	S	K	P	Q	I	T	D	I	N	F	Q	C	S	L	S	S	R	I	A	V	I	G	P	N	G	A	G	K	S	T	L	I	N	V	L
Template Known Secondary structure											T	T			S	T	T	S		S											T	T		S	S		S										T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions