Job Description P36879 Confidence 97.12% Date Thu Jan 5 11:53:55 GMT 2012 Rank 144 Aligned Residues 97 % Identity 18% Template c2hcbC_ PDB info PDB header:replication Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus Resolution 3.51 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		Y	A	L	L	G	P	N	G	A	G	K	S	T	T	I	G	I	I	S	S	.	L	V	N	K	T	S	G	R	V	S	V	F	G	Y	D	L	E	K	D	V	V	N	A	K	R	Q	L	G	L	V	P	Q	E	F	N	F	N	P	F	E	T	V	Q	Q	I	V	V	N	Q	A	G	Y	Y	G	V	E	R	K	E
Query Conservation																						.
Alig confidence																						.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	I	Y	G	S	V	G	T	G	K	T	H	L	L	Q	A	A	G	N	E	A	K	K	R	G	Y	R	V	I	Y	S	S	A	D	D	F	A	Q	A	M	V	E	H	L	K	K	G	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S	S	S	S															T	T																						T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		A	Y	I	R	S	E	K	Y	L	K	Q	L	D	L	W	G	K	R	N	E	R	A	R	M	L	S	G	G	M	K	R	R	L	M	I	A	R	A	L	M	H	E	P	K	L	L	I	L	D	E	P	.	T	A	G	V	D	I	E	L	R	R	S	M	W	G	F	L	K	D	L	N	D	K	G	T	T	I	I	L
Query Conservation																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	F	R	N	M	Y	K	S	V	D	L	L	L	L	D	D	V	Q	F	L	S	G	K	E	R	T	Q	I	E	F	F	H	I	F	N	T	L	Y	L	L	E	K	Q	I	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T		S							G	G	G	G	T	T		S																T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																			165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		192	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		212	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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